Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.06□□□□□ -1.76
UBA52P62987 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.06□□□□□ -1.76
UBA52P62987 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.06□□□□□ -1.76
UBA52P62987 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.06□□□□□ -1.76
UBA52P62987 AC087477.6-201ENST00000559595 843 ntBASIC4.06□□□□□ -1.76
UBA52P62987 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.06□□□□□ -1.76
UBA52P62987 RNU6-84P-201ENST00000607737 102 ntBASIC4.06□□□□□ -1.76
UBA52P62987 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBA52P62987 MIR7703-201ENST00000620784 77 ntBASIC4.06□□□□□ -1.76
UBA52P62987 AC067931.1-201ENST00000624190 671 ntBASIC4.06□□□□□ -1.76
UBA52P62987 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.06□□□□□ -1.76
UBA52P62987 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
UBA52P62987 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.06□□□□□ -1.76
UBA52P62987 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
UBA52P62987 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBA52P62987 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBA52P62987 THAP12P8-201ENST00000447914 2115 ntBASIC4.06□□□□□ -1.76
UBA52P62987 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBA52P62987 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBA52P62987 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBA52P62987 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBA52P62987 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.05□□□□□ -1.76
UBA52P62987 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
UBA52P62987 MFSD8-216ENST00000641147 4009 ntBASIC4.05□□□□□ -1.76
UBA52P62987 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 VN2R3P-201ENST00000422626 1412 ntBASIC4.05□□□□□ -1.76
UBA52P62987 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.05□□□□□ -1.76
UBA52P62987 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
UBA52P62987 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.05□□□□□ -1.76
UBA52P62987 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
UBA52P62987 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 MIR93-201ENST00000385024 80 ntBASIC4.05□□□□□ -1.76
UBA52P62987 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 RNA5SP113-201ENST00000410486 84 ntBASIC4.05□□□□□ -1.76
UBA52P62987 GSTM3P2-201ENST00000412746 530 ntBASIC4.05□□□□□ -1.76
UBA52P62987 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.05□□□□□ -1.76
UBA52P62987 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.05□□□□□ -1.76
UBA52P62987 AC007559.1-201ENST00000428736 355 ntBASIC4.05□□□□□ -1.76
UBA52P62987 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.05□□□□□ -1.76
UBA52P62987 RPL7P11-201ENST00000437586 658 ntBASIC4.05□□□□□ -1.76
UBA52P62987 AC004938.1-201ENST00000438468 308 ntBASIC4.05□□□□□ -1.76
UBA52P62987 AL353748.1-201ENST00000440753 474 ntBASIC4.05□□□□□ -1.76
UBA52P62987 RBMY2TP-201ENST00000451162 947 ntBASIC4.05□□□□□ -1.76
UBA52P62987 ATP5G1P3-201ENST00000463301 410 ntBASIC4.05□□□□□ -1.76
UBA52P62987 RN7SL443P-201ENST00000464331 290 ntBASIC4.05□□□□□ -1.76
UBA52P62987 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.05□□□□□ -1.76
UBA52P62987 RPS6P4-201ENST00000494693 758 ntBASIC4.05□□□□□ -1.76
UBA52P62987 AC010350.1-201ENST00000504908 231 ntBASIC4.05□□□□□ -1.76
UBA52P62987 PPBPP1-201ENST00000510807 373 ntBASIC4.05□□□□□ -1.76
UBA52P62987 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.05□□□□□ -1.76
UBA52P62987 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.05□□□□□ -1.76
UBA52P62987 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.05□□□□□ -1.76
UBA52P62987 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.05□□□□□ -1.76
UBA52P62987 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
UBA52P62987 OR1AB1P-201ENST00000585564 761 ntBASIC4.05□□□□□ -1.76
UBA52P62987 AL391358.1-201ENST00000605342 190 ntBASIC4.05□□□□□ -1.76
UBA52P62987 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.05□□□□□ -1.76
UBA52P62987 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.05□□□□□ -1.76
UBA52P62987 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.05□□□□□ -1.76
UBA52P62987 AC015804.1-201ENST00000622935 435 ntBASIC4.05□□□□□ -1.76
UBA52P62987 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.05□□□□□ -1.76
UBA52P62987 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.05□□□□□ -1.76
UBA52P62987 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.05□□□□□ -1.76
UBA52P62987 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.05□□□□□ -1.76
UBA52P62987 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBA52P62987 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
UBA52P62987 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UBA52P62987 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
UBA52P62987 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.04□□□□□ -1.76
UBA52P62987 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 DDX18P6-201ENST00000450119 1997 ntBASIC4.04□□□□□ -1.76
UBA52P62987 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 HSPD1P14-201ENST00000432666 1618 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AC068254.2-201ENST00000623938 3577 ntBASIC4.04□□□□□ -1.76
UBA52P62987 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.04□□□□□ -1.76
UBA52P62987 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UBA52P62987 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.04□□□□□ -1.76
UBA52P62987 AC009480.2-201ENST00000422916 432 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.04□□□□□ -1.76
UBA52P62987 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.04□□□□□ -1.76
UBA52P62987 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UBA52P62987 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.04□□□□□ -1.76
UBA52P62987 RPL7L1P1-201ENST00000448259 785 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.04□□□□□ -1.76
UBA52P62987 AC104306.1-201ENST00000449702 371 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms