Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 SETP9-201ENST00000423837 832 ntBASIC6.82□□□□□ -1.32
USP11P51784 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.82□□□□□ -1.32
USP11P51784 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.82□□□□□ -1.32
USP11P51784 AL162739.1-201ENST00000450606 307 ntBASIC6.82□□□□□ -1.32
USP11P51784 HMGB1P5-202ENST00000451497 985 ntBASIC6.82□□□□□ -1.32
USP11P51784 GEMIN2P1-201ENST00000454246 752 ntBASIC6.82□□□□□ -1.32
USP11P51784 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 AL355032.1-201ENST00000472981 438 ntBASIC6.82□□□□□ -1.32
USP11P51784 AC124945.1-201ENST00000485133 188 ntBASIC6.82□□□□□ -1.32
USP11P51784 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.82□□□□□ -1.32
USP11P51784 SCARNA18.1-201ENST00000516330 83 ntBASIC6.82□□□□□ -1.32
USP11P51784 SCARNA15.1-201ENST00000516384 125 ntBASIC6.82□□□□□ -1.32
USP11P51784 SNORA31.13-201ENST00000516624 135 ntBASIC6.82□□□□□ -1.32
USP11P51784 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.82□□□□□ -1.32
USP11P51784 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.82□□□□□ -1.32
USP11P51784 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.82□□□□□ -1.32
USP11P51784 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
USP11P51784 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.82□□□□□ -1.32
USP11P51784 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.82□□□□□ -1.32
USP11P51784 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.82□□□□□ -1.32
USP11P51784 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.82□□□□□ -1.32
USP11P51784 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 MIR3912-201ENST00000577566 105 ntBASIC6.82□□□□□ -1.32
USP11P51784 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.82□□□□□ -1.32
USP11P51784 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.82□□□□□ -1.32
USP11P51784 AC044792.1-201ENST00000593294 196 ntBASIC6.82□□□□□ -1.32
USP11P51784 AL136097.3-201ENST00000611097 505 ntBASIC6.82□□□□□ -1.32
USP11P51784 MIR6793-201ENST00000612376 63 ntBASIC6.82□□□□□ -1.32
USP11P51784 AP005264.7-201ENST00000625003 745 ntBASIC6.82□□□□□ -1.32
USP11P51784 AL355480.1-201ENST00000629041 99 ntBASIC6.82□□□□□ -1.32
USP11P51784 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.82□□□□□ -1.32
USP11P51784 AF001550.2-201ENST00000636643 217 ntBASIC6.82□□□□□ -1.32
USP11P51784 MFSD8-245ENST00000641743 948 ntBASIC6.82□□□□□ -1.32
USP11P51784 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 AC132825.1-201ENST00000463573 2247 ntBASIC6.82□□□□□ -1.32
USP11P51784 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.82□□□□□ -1.32
USP11P51784 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.82□□□□□ -1.32
USP11P51784 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.82□□□□□ -1.32
USP11P51784 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
USP11P51784 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 AC083837.1-201ENST00000565297 2994 ntBASIC6.81□□□□□ -1.32
USP11P51784 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
USP11P51784 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.81□□□□□ -1.32
USP11P51784 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 AC090220.1-201ENST00000593078 1699 ntBASIC6.81□□□□□ -1.32
USP11P51784 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.81□□□□□ -1.32
USP11P51784 RNU6-549P-201ENST00000384433 107 ntBASIC6.81□□□□□ -1.32
USP11P51784 SNORD65-201ENST00000391079 73 ntBASIC6.81□□□□□ -1.32
USP11P51784 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
USP11P51784 MIR1282-201ENST00000408865 101 ntBASIC6.81□□□□□ -1.32
USP11P51784 RPL21P108-201ENST00000413857 481 ntBASIC6.81□□□□□ -1.32
USP11P51784 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.81□□□□□ -1.32
USP11P51784 MTND3P21-201ENST00000433774 331 ntBASIC6.81□□□□□ -1.32
USP11P51784 TUBB4BP6-201ENST00000437576 479 ntBASIC6.81□□□□□ -1.32
USP11P51784 BMS1P10-201ENST00000443754 1120 ntBASIC6.81□□□□□ -1.32
USP11P51784 PAXBP1P1-201ENST00000449315 447 ntBASIC6.81□□□□□ -1.32
USP11P51784 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.81□□□□□ -1.32
USP11P51784 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.81□□□□□ -1.32
USP11P51784 AC104849.1-201ENST00000462623 405 ntBASIC6.81□□□□□ -1.32
USP11P51784 RN7SL193P-201ENST00000491708 276 ntBASIC6.81□□□□□ -1.32
USP11P51784 AC090071.1-201ENST00000507713 644 ntBASIC6.81□□□□□ -1.32
USP11P51784 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 AC046134.1-201ENST00000514454 666 ntBASIC6.81□□□□□ -1.32
USP11P51784 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.81□□□□□ -1.32
USP11P51784 AC013701.1-201ENST00000522657 465 ntBASIC6.81□□□□□ -1.32
USP11P51784 TRIM77BP-201ENST00000524985 1119 ntBASIC6.81□□□□□ -1.32
USP11P51784 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.81□□□□□ -1.32
USP11P51784 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.81□□□□□ -1.32
USP11P51784 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 NPM1P5-201ENST00000557228 838 ntBASIC6.81□□□□□ -1.32
USP11P51784 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.81□□□□□ -1.32
USP11P51784 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.81□□□□□ -1.32
USP11P51784 AC005730.3-201ENST00000583067 366 ntBASIC6.81□□□□□ -1.32
USP11P51784 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 AC125494.2-201ENST00000602431 657 ntBASIC6.81□□□□□ -1.32
USP11P51784 AC129778.1-202ENST00000623812 261 ntBASIC6.81□□□□□ -1.32
USP11P51784 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms