Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.68□□□□□ -1.66
BRCA2P51587 AC006058.1-201ENST00000568686 5067 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRCA2P51587 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRCA2P51587 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 RNU1-20P-201ENST00000363314 162 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.68□□□□□ -1.66
BRCA2P51587 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.68□□□□□ -1.66
BRCA2P51587 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRCA2P51587 RPL23AP53-201ENST00000521854 457 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.68□□□□□ -1.66
BRCA2P51587 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.68□□□□□ -1.66
BRCA2P51587 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 SNORA70.9-201ENST00000384370 135 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 AL031121.1-201ENST00000406553 254 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.68□□□□□ -1.66
BRCA2P51587 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC4.68□□□□□ -1.66
BRCA2P51587 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.68□□□□□ -1.66
BRCA2P51587 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRCA2P51587 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRCA2P51587 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRCA2P51587 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.68□□□□□ -1.66
BRCA2P51587 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 AL139099.1-201ENST00000497398 403 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.68□□□□□ -1.66
BRCA2P51587 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.68□□□□□ -1.66
BRCA2P51587 AC092354.2-201ENST00000607786 514 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 AL513477.2-201ENST00000607858 568 ntBASIC4.68□□□□□ -1.66
BRCA2P51587 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRCA2P51587 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRCA2P51587 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 NBPF8-201ENST00000583271 5330 ntBASIC4.67□□□□□ -1.66
BRCA2P51587 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCA2P51587 SERPINA7P1-201ENST00000443077 631 ntBASIC4.67□□□□□ -1.66
BRCA2P51587 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCA2P51587 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.67□□□□□ -1.66
BRCA2P51587 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
BRCA2P51587 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
BRCA2P51587 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
BRCA2P51587 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCA2P51587 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 RHEBP2-201ENST00000450289 600 ntBASIC4.67□□□□□ -1.66
BRCA2P51587 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCA2P51587 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.67□□□□□ -1.66
BRCA2P51587 RN7SKP289-201ENST00000517244 295 ntBASIC4.67□□□□□ -1.66
BRCA2P51587 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC4.67□□□□□ -1.66
BRCA2P51587 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
BRCA2P51587 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRCA2P51587 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BRCA2P51587 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRCA2P51587 AC013429.2-201ENST00000418798 781 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 RPL5P24-201ENST00000463742 885 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BRCA2P51587 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC4.66□□□□□ -1.66
BRCA2P51587 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BRCA2P51587 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
BRCA2P51587 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRCA2P51587 ERCC6-202ENST00000374127 1782 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
BRCA2P51587 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BRCA2P51587 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRCA2P51587 RN7SKP182-201ENST00000410772 298 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 PRDX3P3-201ENST00000447765 522 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 AC012671.1-201ENST00000451912 203 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 NDUFA5P2-201ENST00000519723 344 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.66□□□□□ -1.66
BRCA2P51587 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.66□□□□□ -1.66
BRCA2P51587 AL606490.9-201ENST00000603331 271 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 ELOCP35-201ENST00000604289 336 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.66□□□□□ -1.66
BRCA2P51587 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
BRCA2P51587 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRCA2P51587 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC4.66□□□□□ -1.66
BRCA2P51587 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.66□□□□□ -1.66
BRCA2P51587 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 AP000542.3-201ENST00000623391 6114 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.66□□□□□ -1.66
BRCA2P51587 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BRCA2P51587 MIR30B-201ENST00000384850 88 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 SNORA57.3-201ENST00000411095 141 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.66□□□□□ -1.66
BRCA2P51587 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.66□□□□□ -1.66
BRCA2P51587 BX510359.1-201ENST00000456973 237 ntBASIC4.66□□□□□ -1.66
BRCA2P51587 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms