Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL12P48061 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL12P48061 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 OR5P1P-201ENST00000299512 925 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.58□□□□□ -1.68
CXCL12P48061 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CXCL12P48061 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 RPL7AP52-201ENST00000458096 790 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL12P48061 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL12P48061 NDUFB4P12-201ENST00000513465 390 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 MTND4LP31-201ENST00000514859 294 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 OR8A2P-201ENST00000528631 952 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL12P48061 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 AC026367.3-201ENST00000619032 590 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 AC090506.2-201ENST00000624521 419 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL12P48061 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL12P48061 AL449283.1-201ENST00000602631 3403 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL12P48061 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CXCL12P48061 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL12P48061 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.57□□□□□ -1.68
CXCL12P48061 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL12P48061 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL12P48061 MIR383-201ENST00000362257 73 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL12P48061 ATP5F1P3-201ENST00000397213 657 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 RN7SKP202-201ENST00000410439 330 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 VN1R37P-201ENST00000419096 748 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL12P48061 PRPF38AP1-201ENST00000451976 933 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 AC023632.4-201ENST00000517783 191 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL12P48061 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.57□□□□□ -1.68
CXCL12P48061 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL12P48061 AC006363.1-201ENST00000603806 463 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL12P48061 OR51C1P-201ENST00000608504 942 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 AC099676.1-201ENST00000608886 657 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 AC006065.6-201ENST00000625201 545 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 OR8B1P-202ENST00000641132 1178 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CXCL12P48061 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL12P48061 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL12P48061 AC019072.1-201ENST00000604535 1551 ntBASIC4.57□□□□□ -1.68
CXCL12P48061 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL12P48061 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL12P48061 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL12P48061 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL12P48061 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL12P48061 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL12P48061 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CXCL12P48061 CYP1D1P-201ENST00000416662 1433 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
CXCL12P48061 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL12P48061 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL12P48061 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL12P48061 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CXCL12P48061 RNU1-132P-201ENST00000364300 164 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL12P48061 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CXCL12P48061 RNA5SP171-201ENST00000391071 115 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 EI24P3-201ENST00000399046 1062 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AP000580.1-201ENST00000404439 358 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 PPIAP31-201ENST00000405422 495 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AL035696.2-201ENST00000407941 709 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AL445213.1-201ENST00000412589 747 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 BX119904.3-201ENST00000428194 957 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AC006946.1-201ENST00000429106 328 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL12P48061 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL12P48061 AC041039.1-201ENST00000485656 536 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AL049874.2-201ENST00000492636 288 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AC108475.1-201ENST00000507880 950 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 SNORA67.7-201ENST00000516664 135 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CXCL12P48061 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL12P48061 AC006349.1-201ENST00000555526 235 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL12P48061 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL12P48061 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL12P48061 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 SNX18P1Y-201ENST00000616231 511 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AC244517.3-201ENST00000616254 1235 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AC006133.1-201ENST00000617106 264 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AL356863.1-201ENST00000623378 1080 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 AC112484.5-201ENST00000624189 228 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL12P48061 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL12P48061 AL139254.3-201ENST00000641097 674 ntBASIC4.56□□□□□ -1.68
CXCL12P48061 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms