Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
BRCC3P46736 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
BRCC3P46736 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.95□□□□□ -1.62
BRCC3P46736 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCC3P46736 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
BRCC3P46736 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCC3P46736 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCC3P46736 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.95□□□□□ -1.62
BRCC3P46736 AL445487.1-201ENST00000415694 1580 ntBASIC4.95□□□□□ -1.62
BRCC3P46736 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRCC3P46736 AC108751.5-201ENST00000492880 1336 ntBASIC4.95□□□□□ -1.62
BRCC3P46736 SMG1P4-204ENST00000523028 4131 ntBASIC4.95□□□□□ -1.62
BRCC3P46736 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
BRCC3P46736 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
BRCC3P46736 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCC3P46736 AL031119.1-201ENST00000404707 1879 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCC3P46736 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCC3P46736 CDC27P2-201ENST00000425026 1922 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 AC068538.1-201ENST00000376856 336 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCC3P46736 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.94□□□□□ -1.62
BRCC3P46736 AL592293.2-201ENST00000422292 996 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCC3P46736 FTH1P16-201ENST00000435241 552 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 RSL24D1P2-201ENST00000445584 366 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 TPT1P12-201ENST00000448968 492 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 SCARNA10-201ENST00000459255 330 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 RPL21P126-201ENST00000470049 478 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 AC025164.1-201ENST00000496249 478 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 RNA5SP249-201ENST00000516127 99 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.94□□□□□ -1.62
BRCC3P46736 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
BRCC3P46736 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCC3P46736 SETP1-201ENST00000556014 845 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCC3P46736 AL356218.2-201ENST00000605264 187 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCC3P46736 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
BRCC3P46736 AL731532.2-201ENST00000623542 1953 ntBASIC4.94□□□□□ -1.62
BRCC3P46736 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
BRCC3P46736 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCC3P46736 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCC3P46736 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCC3P46736 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
BRCC3P46736 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCC3P46736 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCC3P46736 MTND5P23-201ENST00000430812 1655 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BRCC3P46736 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCC3P46736 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BRCC3P46736 AL022322.2-201ENST00000624072 20397 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCC3P46736 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCC3P46736 OR1F12-201ENST00000402365 945 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 Z98745.1-201ENST00000402553 494 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 AP000580.1-201ENST00000404439 358 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.93□□□□□ -1.62
BRCC3P46736 MTATP6P19-201ENST00000413797 659 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCC3P46736 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCC3P46736 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCC3P46736 RPL23AP93-201ENST00000440847 484 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 RPL21P133-201ENST00000443666 476 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.93□□□□□ -1.62
BRCC3P46736 RPS23P7-201ENST00000466210 444 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 RN7SL385P-201ENST00000468873 276 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCC3P46736 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.93□□□□□ -1.62
BRCC3P46736 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.93□□□□□ -1.62
BRCC3P46736 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRCC3P46736 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCC3P46736 AL390334.1-201ENST00000556395 450 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 AC115286.1-201ENST00000604298 434 ntBASIC4.93□□□□□ -1.62
BRCC3P46736 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCC3P46736 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRCC3P46736 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCC3P46736 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BRCC3P46736 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCC3P46736 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.93□□□□□ -1.62
BRCC3P46736 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCC3P46736 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCC3P46736 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
BRCC3P46736 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 AC017079.1-201ENST00000333650 415 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 RNU4-25P-201ENST00000410569 230 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 TMBIM7P-201ENST00000418074 855 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 OR5M12P-201ENST00000423388 929 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 RPL12P34-201ENST00000424532 479 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCC3P46736 EIF2S2P3-201ENST00000428356 999 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCC3P46736 CBX1P1-201ENST00000440184 427 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms