Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 DDX18P5-201ENST00000534547 1306 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 U3.2-201ENST00000362981 210 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SLC6A4P31645 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SLC6A4P31645 RAP1BP1-201ENST00000412709 553 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 TAF13P2-201ENST00000416876 286 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC6A4P31645 MTND4P20-201ENST00000424125 869 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 RAC1P8-201ENST00000427086 527 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC6A4P31645 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC6A4P31645 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC6A4P31645 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC6A4P31645 AC233982.1-201ENST00000451247 436 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 MRPL42P4-201ENST00000453267 443 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AC083899.1-201ENST00000454465 3819 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 TPTE2P5-203ENST00000458118 728 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 OR2AO1P-201ENST00000476497 403 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC6A4P31645 AC091860.1-201ENST00000505723 432 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 HMGB1P44-201ENST00000508597 572 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC6A4P31645 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC6A4P31645 RNA5SP34-201ENST00000516887 130 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 SCARNA16.4-201ENST00000516956 187 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC6A4P31645 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC6A4P31645 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC6A4P31645 AC087465.1-201ENST00000560574 245 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AC009962.1-201ENST00000567327 3813 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AC025165.5-201ENST00000602802 578 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AL358072.1-201ENST00000604156 575 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AL392048.1-201ENST00000613946 534 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AC135068.5-201ENST00000624197 983 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AC000095.2-202ENST00000637415 154 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 SAMMSON-209ENST00000641222 1100 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 AC073869.8-201ENST00000641806 335 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC6A4P31645 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SLC6A4P31645 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SLC6A4P31645 NLRP3P1-201ENST00000622303 1785 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SLC6A4P31645 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AC021755.1-201ENST00000559747 1447 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 Z98755.1-201ENST00000407015 1384 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 SNORA58B-201ENST00000364259 136 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 RNU6-353P-201ENST00000364266 108 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 RNU6-452P-201ENST00000384406 107 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 RNU6-83P-201ENST00000384568 112 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.59□□□□□ -1.51
SLC6A4P31645 RNU4-72P-201ENST00000410754 173 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 OR4K6P-201ENST00000416478 897 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 RPL23AP4-201ENST00000427757 463 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.59□□□□□ -1.51
SLC6A4P31645 HMGB3P10-201ENST00000434734 572 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 ATP5C1P1-201ENST00000441945 895 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AL672138.1-201ENST00000450604 1015 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 NPM1P13-201ENST00000452663 865 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AL133477.1-201ENST00000457472 514 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 PSMC1P13-201ENST00000458195 985 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 RNU7-140P-201ENST00000459546 60 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 RN7SL188P-201ENST00000469842 285 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 RPL23AP37-201ENST00000479658 549 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A4P31645 MTND1P22-201ENST00000510572 951 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A4P31645 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A4P31645 RNU6-941P-201ENST00000516346 108 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 snoZ278.1-201ENST00000517059 112 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 AC010306.1-201ENST00000523223 1117 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 AC087373.1-201ENST00000524920 491 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 OR8G3P-201ENST00000533406 921 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A4P31645 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AP001542.2-201ENST00000593141 364 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms