Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RPS29P27-201ENST00000463711 170 ntBASIC9.34□□□□□ -0.91
HOXD11P31277 AC090311.1-201ENST00000490739 249 ntBASIC9.34□□□□□ -0.91
HOXD11P31277 AC146949.1-201ENST00000505946 423 ntBASIC9.34□□□□□ -0.91
HOXD11P31277 AC146944.1-201ENST00000508439 418 ntBASIC9.34□□□□□ -0.91
HOXD11P31277 SSR2-215ENST00000529008 849 ntTSL 5 BASIC9.34□□□□□ -0.91
HOXD11P31277 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC9.34□□□□□ -0.91
HOXD11P31277 AC144548.1-201ENST00000549577 324 ntBASIC9.34□□□□□ -0.91
HOXD11P31277 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC9.34□□□□□ -0.91
HOXD11P31277 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC9.34□□□□□ -0.91
HOXD11P31277 MED15P6-202ENST00000621415 787 ntBASIC9.34□□□□□ -0.91
HOXD11P31277 FAM238C-205ENST00000640641 391 ntBASIC9.34□□□□□ -0.91
HOXD11P31277 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 KIAA0907-202ENST00000368320 4499 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
HOXD11P31277 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
HOXD11P31277 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 SRRM1P3-201ENST00000426911 2678 ntBASIC9.34□□□□□ -0.91
HOXD11P31277 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC9.34□□□□□ -0.91
HOXD11P31277 SERPINB10-201ENST00000238508 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 ASTN1-202ENST00000361833 7116 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HOXD11P31277 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
HOXD11P31277 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC9.33□□□□□ -0.92
HOXD11P31277 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC9.33□□□□□ -0.92
HOXD11P31277 KIF24-202ENST00000402558 6131 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 HMGCLL1-206ENST00000428842 2437 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
HOXD11P31277 RN7SKP191-201ENST00000364713 306 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 RNA5SP442-201ENST00000365050 107 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 RNU6-213P-201ENST00000384051 104 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
HOXD11P31277 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 AC099677.1-201ENST00000420575 175 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 RPL7AP51-201ENST00000422016 760 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 AC009296.1-201ENST00000443146 155 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AC006463.1-201ENST00000445929 232 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AL451074.1-202ENST00000453762 989 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 AC146944.2-203ENST00000502493 354 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 NDUFB5P1-201ENST00000508134 564 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AC139495.1-202ENST00000513164 354 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 RNU6-1114P-201ENST00000516022 107 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 AC109810.1-201ENST00000534066 224 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 AC133485.4-201ENST00000561835 220 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AC138907.4-201ENST00000570107 226 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 RN7SL468P-201ENST00000582256 294 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AC025588.3-201ENST00000604182 274 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC9.33□□□□□ -0.92
HOXD11P31277 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 U1.30-201ENST00000622285 165 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 MIR3160-2-201ENST00000637870 81 ntBASIC9.33□□□□□ -0.92
HOXD11P31277 CLIP1-213ENST00000540338 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
HOXD11P31277 MARS2-201ENST00000282276 3019 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
HOXD11P31277 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 ZNF23-205ENST00000497160 2799 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HOXD11P31277 C17orf77-202ENST00000392620 2525 ntTSL 2 BASIC9.33□□□□□ -0.92
HOXD11P31277 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
HOXD11P31277 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC9.33□□□□□ -0.92
HOXD11P31277 LAMC2-201ENST00000264144 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 CHD2-207ENST00000626782 2131 ntTSL 2 BASIC9.32□□□□□ -0.92
HOXD11P31277 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC9.32□□□□□ -0.92
HOXD11P31277 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC9.32□□□□□ -0.92
HOXD11P31277 CACNB4-202ENST00000360283 1885 ntTSL 5 BASIC9.32□□□□□ -0.92
HOXD11P31277 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms