Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC8P31273 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC8P31273 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC8P31273 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXC8P31273 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC8P31273 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC8P31273 AC002525.1-201ENST00000624392 1622 ntBASIC5.3□□□□□ -1.56
HOXC8P31273 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC8P31273 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HOXC8P31273 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 AC027228.2-201ENST00000567141 2154 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AC017002.4-201ENST00000604721 1525 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC8P31273 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC8P31273 RPEP3-201ENST00000425462 676 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 CENPIP1-201ENST00000425713 902 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AL732292.1-201ENST00000426692 226 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 MTND4LP14-201ENST00000429447 288 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 RPS17P8-201ENST00000434525 335 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 SDR42E1P3-201ENST00000438345 502 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC8P31273 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 RPL7AP10-201ENST00000481016 791 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC8P31273 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC8P31273 AC093770.1-201ENST00000511559 571 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 SNORA70.11-201ENST00000515987 138 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 SNORA70.13-201ENST00000516116 138 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC8P31273 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC8P31273 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.29□□□□□ -1.56
HOXC8P31273 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC8P31273 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 SULT1C2P2-201ENST00000562517 294 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 ADAD1P2-201ENST00000588476 646 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AL356218.2-201ENST00000605264 187 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AC023813.4-201ENST00000607580 580 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AC135803.1-201ENST00000608748 565 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXC8P31273 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXC8P31273 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC8P31273 SCARNA15-201ENST00000607520 4325 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC8P31273 OR56B2P-202ENST00000641377 2453 ntBASIC5.29□□□□□ -1.56
HOXC8P31273 AC140134.1-201ENST00000511830 3544 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
HOXC8P31273 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC8P31273 AC025574.1-201ENST00000554784 1653 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HOXC8P31273 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
HOXC8P31273 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC8P31273 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC8P31273 AL137100.1-201ENST00000556703 1620 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 FAM3C2-201ENST00000312214 681 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 MIR133A2-201ENST00000347538 102 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 U3.22-201ENST00000391120 215 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AL356967.1-201ENST00000406305 431 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 RNU2-72P-201ENST00000411175 163 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXC8P31273 CHIAP3-201ENST00000423668 1133 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC8P31273 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC8P31273 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC8P31273 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC8P31273 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC8P31273 AL157827.1-201ENST00000447622 132 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC8P31273 AC108463.1-201ENST00000450258 347 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC8P31273 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC8P31273 NIP7P2-201ENST00000485801 544 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AC073073.1-201ENST00000493920 463 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 HMGB1P3-201ENST00000502802 616 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AC073358.1-201ENST00000505671 684 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC8P31273 RNU6-467P-201ENST00000517027 110 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC8P31273 MTND1P36-201ENST00000522384 936 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXC8P31273 AC100784.1-201ENST00000522790 310 ntBASIC5.28□□□□□ -1.56
HOXC8P31273 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC8P31273 AC068831.4-201ENST00000556118 109 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms