Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMAP28067 RNU6-697P-201ENST00000363348 107 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMAP28067 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMAP28067 JKAMPP1-201ENST00000413804 919 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 TRIM60P17-201ENST00000415181 719 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 TRGV7-201ENST00000427089 353 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 RPL21P91-201ENST00000429231 479 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 RPL7L1P9-201ENST00000431298 745 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC026348.1-201ENST00000462549 1053 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 RN7SL466P-201ENST00000497546 295 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 SNORD116-26-201ENST00000516006 96 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 DEFB109D-201ENST00000529497 240 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 UBTFL9-201ENST00000534504 1148 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC022404.1-201ENST00000555320 273 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC093249.4-201ENST00000564755 259 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC025946.2-201ENST00000603398 234 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC090953.1-201ENST00000604305 1092 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AL359513.1-201ENST00000614364 557 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AL138721.1-201ENST00000616756 179 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC067852.7-201ENST00000623270 535 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC136428.4-201ENST00000634254 1155 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMAP28067 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DMAP28067 AC007342.7-201ENST00000624610 2337 ntBASIC4.04□□□□□ -1.76
HLA-DMAP28067 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 AL133412.1-201ENST00000380194 2992 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 AL031985.3-201ENST00000565390 2449 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 RNU1-15P-201ENST00000353977 144 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 RNU6-1279P-201ENST00000383917 103 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 RNU6-225P-201ENST00000384613 103 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 AL450992.3-201ENST00000413192 568 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 KNOP1P3-201ENST00000446933 426 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 RNA5SP473-201ENST00000516402 125 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 OR10G5P-201ENST00000532733 358 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 AC068714.1-201ENST00000559623 800 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 ELOCP28-201ENST00000590044 317 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 SNX6P1-201ENST00000601728 1224 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 HMGB1P50-201ENST00000605814 607 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 AC022960.2-201ENST00000616300 666 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 AL355852.1-201ENST00000454081 1771 ntBASIC4.03□□□□□ -1.76
HLA-DMAP28067 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMAP28067 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
HLA-DMAP28067 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
HLA-DMAP28067 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 AC017007.4-201ENST00000503353 1352 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMAP28067 SNORA17.1-201ENST00000362945 126 ntBASIC4.02□□□□□ -1.77
HLA-DMAP28067 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
HLA-DMAP28067 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms