Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL8A2P25067 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL8A2P25067 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.86□□□□□ -1.79
COL8A2P25067 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
COL8A2P25067 AC135352.1-201ENST00000506173 1418 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.86□□□□□ -1.79
COL8A2P25067 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.86□□□□□ -1.79
COL8A2P25067 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
COL8A2P25067 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.85□□□□□ -1.79
COL8A2P25067 AC025031.4-201ENST00000621248 3271 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COL8A2P25067 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 AL359922.3-201ENST00000624779 1670 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 FAM3C2-201ENST00000312214 681 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
COL8A2P25067 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
COL8A2P25067 RPL23AP59-201ENST00000399415 461 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 AL592293.2-201ENST00000422292 996 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 AP001324.1-201ENST00000428553 399 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.85□□□□□ -1.79
COL8A2P25067 NDUFA5P1-201ENST00000433858 341 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 FTH1P16-201ENST00000435241 552 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.85□□□□□ -1.79
COL8A2P25067 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 RPS23P7-201ENST00000466210 444 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
COL8A2P25067 AC025674.1-201ENST00000507074 324 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.85□□□□□ -1.79
COL8A2P25067 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.85□□□□□ -1.79
COL8A2P25067 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.85□□□□□ -1.79
COL8A2P25067 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.85□□□□□ -1.79
COL8A2P25067 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.85□□□□□ -1.79
COL8A2P25067 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.85□□□□□ -1.79
COL8A2P25067 AL451049.1-201ENST00000608672 497 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 AL035461.2-201ENST00000619201 524 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COL8A2P25067 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.85□□□□□ -1.79
COL8A2P25067 LINC01808-202ENST00000641680 1116 ntBASIC3.85□□□□□ -1.79
COL8A2P25067 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
COL8A2P25067 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.85□□□□□ -1.79
COL8A2P25067 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
COL8A2P25067 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL8A2P25067 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL8A2P25067 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL8A2P25067 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL8A2P25067 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
COL8A2P25067 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
COL8A2P25067 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.84□□□□□ -1.79
COL8A2P25067 AC004690.1-201ENST00000418216 328 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 CHIAP3-201ENST00000423668 1133 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.84□□□□□ -1.79
COL8A2P25067 TPT1P12-201ENST00000448968 492 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.84□□□□□ -1.79
COL8A2P25067 RN7SL385P-201ENST00000468873 276 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 AC011276.1-201ENST00000469688 323 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.84□□□□□ -1.79
COL8A2P25067 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.84□□□□□ -1.79
COL8A2P25067 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.84□□□□□ -1.79
COL8A2P25067 RN7SKP46-201ENST00000515942 234 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 IGLVIV-65-201ENST00000517313 360 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.84□□□□□ -1.79
COL8A2P25067 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.84□□□□□ -1.79
COL8A2P25067 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
COL8A2P25067 MIR4697-201ENST00000582977 78 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.84□□□□□ -1.79
COL8A2P25067 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.84□□□□□ -1.79
COL8A2P25067 AC115286.1-201ENST00000604298 434 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.84□□□□□ -1.79
COL8A2P25067 AC012409.3-201ENST00000611343 981 ntBASIC3.84□□□□□ -1.79
COL8A2P25067 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.84□□□□□ -1.79
COL8A2P25067 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL8A2P25067 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL8A2P25067 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.84□□□□□ -1.79
COL8A2P25067 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
COL8A2P25067 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.84□□□□□ -1.8
COL8A2P25067 UGT2B26P-201ENST00000508672 1613 ntBASIC3.84□□□□□ -1.8
COL8A2P25067 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL8A2P25067 CDY11P-201ENST00000447168 1651 ntBASIC3.84□□□□□ -1.8
COL8A2P25067 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL8A2P25067 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
COL8A2P25067 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.84□□□□□ -1.8
COL8A2P25067 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.84□□□□□ -1.8
COL8A2P25067 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL8A2P25067 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL8A2P25067 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL8A2P25067 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.83□□□□□ -1.8
COL8A2P25067 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL8A2P25067 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
COL8A2P25067 BMS1P3-201ENST00000372011 932 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 SDHCP2-201ENST00000398565 501 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 AL356387.2-201ENST00000422272 243 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL8A2P25067 EIF2S2P2-201ENST00000447161 982 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms