Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC093770.1-201ENST00000511559 571 ntBASIC4.92□□□□□ -1.62
CDH3P22223 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH3P22223 RNA5SP303-201ENST00000516192 130 ntBASIC4.92□□□□□ -1.62
CDH3P22223 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH3P22223 NPM1P6-201ENST00000521088 871 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 OR4R2P-201ENST00000530815 597 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH3P22223 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH3P22223 AC027176.2-201ENST00000559166 746 ntBASIC4.92□□□□□ -1.62
CDH3P22223 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 AC090312.1-201ENST00000580637 348 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH3P22223 AC087283.1-201ENST00000604029 1074 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AC091905.4-201ENST00000623432 202 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AC080188.3-201ENST00000624842 748 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AC097372.4-201ENST00000625025 466 ntBASIC4.92□□□□□ -1.62
CDH3P22223 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH3P22223 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 AC110792.3-201ENST00000595906 1614 ntBASIC4.92□□□□□ -1.62
CDH3P22223 PHKBP1-201ENST00000450951 1951 ntBASIC4.92□□□□□ -1.62
CDH3P22223 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 OR51H2P-202ENST00000641424 3046 ntBASIC4.92□□□□□ -1.62
CDH3P22223 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH3P22223 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDH3P22223 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 AC090017.1-201ENST00000548612 1779 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 AC132825.1-201ENST00000463573 2247 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH3P22223 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 MIR550A3-201ENST00000390735 95 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AL390316.1-201ENST00000406279 553 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH3P22223 AC046176.1-201ENST00000435260 1170 ntBASIC4.91□□□□□ -1.62
CDH3P22223 PSMD10P3-201ENST00000437000 448 ntBASIC4.91□□□□□ -1.62
CDH3P22223 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AC245517.2-201ENST00000442890 346 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH3P22223 KNOP1P3-201ENST00000446933 426 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH3P22223 AC073587.1-201ENST00000447093 876 ntBASIC4.91□□□□□ -1.62
CDH3P22223 CCDC75P1-201ENST00000469247 791 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH3P22223 LARP7P4-201ENST00000481075 878 ntBASIC4.91□□□□□ -1.62
CDH3P22223 COX6B1P5-201ENST00000509843 249 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AC110775.1-201ENST00000513721 462 ntBASIC4.91□□□□□ -1.62
CDH3P22223 OR7E128P-201ENST00000532736 1024 ntBASIC4.91□□□□□ -1.62
CDH3P22223 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 NMNAT1P1-201ENST00000554095 876 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 MIR4436B2-201ENST00000581415 91 ntBASIC4.91□□□□□ -1.62
CDH3P22223 MIR4436B1-201ENST00000583272 91 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH3P22223 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 AC025016.1-201ENST00000616746 682 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AC253576.2-201ENST00000618815 580 ntBASIC4.91□□□□□ -1.62
CDH3P22223 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 AP000648.2-201ENST00000624182 404 ntBASIC4.91□□□□□ -1.62
CDH3P22223 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH3P22223 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH3P22223 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH3P22223 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 AP000756.2-201ENST00000624168 2567 ntBASIC4.91□□□□□ -1.62
CDH3P22223 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDH3P22223 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH3P22223 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 AC009501.3-201ENST00000605001 1352 ntBASIC4.91□□□□□ -1.62
CDH3P22223 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH3P22223 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH3P22223 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDH3P22223 AP000542.2-201ENST00000623199 6179 ntBASIC4.9□□□□□ -1.62
CDH3P22223 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.9□□□□□ -1.62
CDH3P22223 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CDH3P22223 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDH3P22223 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH3P22223 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDH3P22223 RNA5SP123-201ENST00000363244 119 ntBASIC4.9□□□□□ -1.63
CDH3P22223 SNORD115-48-201ENST00000364764 76 ntBASIC4.9□□□□□ -1.63
CDH3P22223 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH3P22223 Z97832.1-201ENST00000402490 328 ntBASIC4.9□□□□□ -1.63
CDH3P22223 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms