Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL035090.1-201ENST00000454835 332 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.19□□□□□ -1.58
CAPN3P20807 AC245028.2-201ENST00000458673 253 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AC021660.1-201ENST00000465006 554 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AC087672.1-201ENST00000479876 766 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AL049874.2-201ENST00000492636 288 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 RPL30P11-201ENST00000495304 339 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 MYL12BP2-201ENST00000503948 512 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AC098799.3-201ENST00000506095 438 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 HMGB1P23-201ENST00000518743 568 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.19□□□□□ -1.58
CAPN3P20807 PDCD5P1-201ENST00000543528 309 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.19□□□□□ -1.58
CAPN3P20807 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.19□□□□□ -1.58
CAPN3P20807 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.19□□□□□ -1.58
CAPN3P20807 OR4U1P-201ENST00000554958 912 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AL049872.1-201ENST00000556323 322 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.19□□□□□ -1.58
CAPN3P20807 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.19□□□□□ -1.58
CAPN3P20807 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.19□□□□□ -1.58
CAPN3P20807 AC015802.2-201ENST00000589690 189 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 DNAJC19P3-201ENST00000594491 331 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AC131238.1-201ENST00000617135 328 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AL109620.1-201ENST00000618738 1197 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 AC009704.2-201ENST00000618739 483 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 CU639417.4-201ENST00000623928 207 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.19□□□□□ -1.58
CAPN3P20807 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CAPN3P20807 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CAPN3P20807 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CAPN3P20807 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CAPN3P20807 Z95327.2-201ENST00000414579 1873 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CAPN3P20807 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CAPN3P20807 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CAPN3P20807 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CAPN3P20807 AC104446.1-201ENST00000613728 1321 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.19□□□□□ -1.58
CAPN3P20807 CASC19-204ENST00000641001 2055 ntBASIC5.19□□□□□ -1.58
CAPN3P20807 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CAPN3P20807 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CAPN3P20807 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CAPN3P20807 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.18□□□□□ -1.58
CAPN3P20807 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.18□□□□□ -1.58
CAPN3P20807 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CAPN3P20807 RNA5SP131-201ENST00000365452 119 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.18□□□□□ -1.58
CAPN3P20807 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 DBIP1-201ENST00000401435 260 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 AL355615.1-201ENST00000406187 641 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 SNORA11C-201ENST00000408532 129 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 RN7SKP59-201ENST00000410520 314 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.18□□□□□ -1.58
CAPN3P20807 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.18□□□□□ -1.58
CAPN3P20807 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CAPN3P20807 AC023347.2-201ENST00000433994 462 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.18□□□□□ -1.58
CAPN3P20807 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.18□□□□□ -1.58
CAPN3P20807 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.18□□□□□ -1.58
CAPN3P20807 FABP5P3-201ENST00000437960 408 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AC009263.1-201ENST00000441193 1239 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.18□□□□□ -1.58
CAPN3P20807 AL450023.1-201ENST00000450868 751 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 RN7SL184P-201ENST00000488308 297 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AC109464.1-201ENST00000511091 819 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.18□□□□□ -1.58
CAPN3P20807 AP003355.1-201ENST00000518956 587 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.18□□□□□ -1.58
CAPN3P20807 AC068339.2-201ENST00000534395 618 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.18□□□□□ -1.58
CAPN3P20807 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.18□□□□□ -1.58
CAPN3P20807 AC104072.1-201ENST00000568817 668 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.18□□□□□ -1.58
CAPN3P20807 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.18□□□□□ -1.58
CAPN3P20807 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.18□□□□□ -1.58
CAPN3P20807 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.18□□□□□ -1.58
CAPN3P20807 AL121612.2-201ENST00000612261 482 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 RN7SL544P-201ENST00000617232 284 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AC234782.5-201ENST00000617723 324 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AC243756.2-201ENST00000618406 463 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 RN7SL763P-201ENST00000620922 284 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 AL390318.1-201ENST00000624564 687 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
CAPN3P20807 CASC19-264ENST00000641912 1184 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 SRRM1P3-201ENST00000426911 2678 ntBASIC5.18□□□□□ -1.58
CAPN3P20807 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CAPN3P20807 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.18□□□□□ -1.58
CAPN3P20807 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CAPN3P20807 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.17□□□□□ -1.58
CAPN3P20807 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
CAPN3P20807 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.17□□□□□ -1.58
CAPN3P20807 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms