Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RPL26P28-201ENST00000451325 435 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.72□□□□□ -1.33
NFKB1P19838 RN7SL372P-201ENST00000461982 298 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC007537.2-201ENST00000472093 511 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 RN7SL70P-201ENST00000478322 302 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC068522.1-201ENST00000482895 345 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.72□□□□□ -1.33
NFKB1P19838 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC010486.1-201ENST00000511793 424 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.72□□□□□ -1.33
NFKB1P19838 RFPL4AP3-201ENST00000515267 345 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 RNU6-885P-201ENST00000516607 104 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.72□□□□□ -1.33
NFKB1P19838 OR52K3P-201ENST00000531655 943 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AP003034.1-201ENST00000534621 422 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC027667.1-201ENST00000545814 304 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC089984.3-201ENST00000552838 363 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC078814.3-201ENST00000553036 491 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC018558.5-201ENST00000565840 952 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 ZNF322P1-201ENST00000568013 1209 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC141257.3-201ENST00000572906 215 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC015917.1-201ENST00000579654 510 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.72□□□□□ -1.33
NFKB1P19838 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.72□□□□□ -1.33
NFKB1P19838 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 AC079684.1-201ENST00000621405 437 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
NFKB1P19838 PISRT1-201ENST00000626175 531 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 AC110994.2-201ENST00000635481 492 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC119674.1-212ENST00000641155 993 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.72□□□□□ -1.33
NFKB1P19838 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 AC016251.2-201ENST00000623393 3089 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NFKB1P19838 MAPK10-357ENST00000641831 2858 ntBASIC6.71□□□□□ -1.33
NFKB1P19838 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NFKB1P19838 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NFKB1P19838 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NFKB1P19838 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
NFKB1P19838 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.71□□□□□ -1.33
NFKB1P19838 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.71□□□□□ -1.33
NFKB1P19838 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NFKB1P19838 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC005034.3-201ENST00000604845 1747 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.71□□□□□ -1.34
NFKB1P19838 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 AC093225.1-201ENST00000506867 1408 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 RNU6-216P-201ENST00000363282 104 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 SNORA51.2-201ENST00000364595 132 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.71□□□□□ -1.34
NFKB1P19838 RNU6-533P-201ENST00000384144 107 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 Z97832.1-201ENST00000402490 328 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AL603766.1-201ENST00000407763 664 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AL139128.1-201ENST00000413921 941 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 MTND3P17-201ENST00000416968 344 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 PIGFP2-201ENST00000421400 651 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 PTPN2P1-201ENST00000423212 1072 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 USP9YP36-201ENST00000424581 829 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.71□□□□□ -1.34
NFKB1P19838 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.71□□□□□ -1.34
NFKB1P19838 GAPDHP33-201ENST00000443168 1013 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 TRBV8-2-201ENST00000475637 270 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 RN7SL655P-201ENST00000486087 298 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AC022415.1-202ENST00000486612 523 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AC090638.1-201ENST00000498296 909 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 NPM1P27-201ENST00000502784 830 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC073581.1-201ENST00000519036 575 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AC008429.4-201ENST00000521201 182 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 DEFB131D-201ENST00000526803 184 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.71□□□□□ -1.34
NFKB1P19838 RPL21P5-201ENST00000554662 472 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 CYCSP2-201ENST00000558168 301 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms