Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
XRCC1P18887 AC087565.3-202ENST00000642085 1603 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AL356317.1-201ENST00000396110 1436 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
XRCC1P18887 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
XRCC1P18887 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
XRCC1P18887 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
XRCC1P18887 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
XRCC1P18887 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 IL6STP1-201ENST00000346911 1020 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 CYB5AP4-201ENST00000396692 399 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.71□□□□□ -1.66
XRCC1P18887 BX510359.2-201ENST00000417920 305 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AC244453.4-201ENST00000419150 388 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.71□□□□□ -1.66
XRCC1P18887 AC092162.1-201ENST00000432828 434 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AC005154.2-201ENST00000438110 379 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.71□□□□□ -1.66
XRCC1P18887 SCARNA22-201ENST00000503991 125 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
XRCC1P18887 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 SOX5P1-201ENST00000524155 1127 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.71□□□□□ -1.66
XRCC1P18887 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.71□□□□□ -1.66
XRCC1P18887 AC137768.1-201ENST00000549998 553 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.71□□□□□ -1.66
XRCC1P18887 AL049839.1-201ENST00000556151 657 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.71□□□□□ -1.66
XRCC1P18887 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 FAM27B-201ENST00000610601 213 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
XRCC1P18887 AC234782.5-201ENST00000617723 324 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AC015804.1-201ENST00000622935 435 ntBASIC4.71□□□□□ -1.66
XRCC1P18887 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
XRCC1P18887 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
XRCC1P18887 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
XRCC1P18887 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.71□□□□□ -1.66
XRCC1P18887 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
XRCC1P18887 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.71□□□□□ -1.66
XRCC1P18887 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.7□□□□□ -1.66
XRCC1P18887 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
XRCC1P18887 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
XRCC1P18887 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
XRCC1P18887 RN7SKP115-201ENST00000363177 317 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
XRCC1P18887 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.7□□□□□ -1.66
XRCC1P18887 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.7□□□□□ -1.66
XRCC1P18887 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
XRCC1P18887 U3.30-201ENST00000391308 210 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.7□□□□□ -1.66
XRCC1P18887 MIR298-201ENST00000401212 88 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 U3.35-201ENST00000408405 208 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.7□□□□□ -1.66
XRCC1P18887 AL359265.2-201ENST00000434367 631 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 HMGB3P10-201ENST00000434734 572 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 XKRYP6-201ENST00000440468 1116 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AL138878.2-201ENST00000440581 1241 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.7□□□□□ -1.66
XRCC1P18887 XKRYP3-201ENST00000442113 1116 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.7□□□□□ -1.66
XRCC1P18887 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.7□□□□□ -1.66
XRCC1P18887 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.7□□□□□ -1.66
XRCC1P18887 AC104971.1-201ENST00000495117 578 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 RN7SL558P-201ENST00000497468 299 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 TCP11X3P-202ENST00000514289 1254 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.7□□□□□ -1.66
XRCC1P18887 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.7□□□□□ -1.66
XRCC1P18887 RNU6-751P-201ENST00000516382 101 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.7□□□□□ -1.66
XRCC1P18887 CR383656.6-201ENST00000550518 394 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.7□□□□□ -1.66
XRCC1P18887 AL137072.1-201ENST00000603444 466 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AL022401.1-201ENST00000619498 108 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.7□□□□□ -1.66
XRCC1P18887 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.7□□□□□ -1.66
XRCC1P18887 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
XRCC1P18887 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
XRCC1P18887 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
XRCC1P18887 AL359922.3-201ENST00000624779 1670 ntBASIC4.7□□□□□ -1.66
XRCC1P18887 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
XRCC1P18887 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
XRCC1P18887 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.7□□□□□ -1.66
XRCC1P18887 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
XRCC1P18887 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.69□□□□□ -1.66
XRCC1P18887 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.69□□□□□ -1.66
XRCC1P18887 AC079741.1-201ENST00000321498 212 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 MIR192-201ENST00000384915 110 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 MIR195-201ENST00000385194 87 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
XRCC1P18887 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.69□□□□□ -1.66
XRCC1P18887 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 RPA2P2-201ENST00000419698 796 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms