Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGA1P17096 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGA1P17096 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HMGA1P17096 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGA1P17096 MFSD8-220ENST00000641243 1422 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGA1P17096 AL161909.1-201ENST00000397390 712 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AC062016.2-201ENST00000420950 676 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGA1P17096 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 AC009963.2-201ENST00000453431 138 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 RPL23AP37-201ENST00000479658 549 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 RPL35P6-201ENST00000490024 372 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AC008958.1-201ENST00000511047 682 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGA1P17096 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGA1P17096 OR5BC1P-201ENST00000529327 739 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AP001804.2-201ENST00000533932 910 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGA1P17096 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGA1P17096 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGA1P17096 MIR3936-201ENST00000584304 110 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 HMGB2P1-201ENST00000591146 634 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 RNF138P2-201ENST00000603490 592 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AC008966.2-201ENST00000606157 453 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGA1P17096 AC091905.2-201ENST00000623143 306 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.58□□□□□ -1.68
HMGA1P17096 MAPK10-286ENST00000641208 8747 ntBASIC4.58□□□□□ -1.68
HMGA1P17096 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HMGA1P17096 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGA1P17096 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGA1P17096 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGA1P17096 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 AC005261.4-201ENST00000600047 1385 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 RNA5SP28-201ENST00000363841 119 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HMGA1P17096 AC097374.1-203ENST00000400783 485 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 MIR1193-201ENST00000408109 78 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 RPS20P14-201ENST00000412545 360 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 AL121878.1-201ENST00000418638 859 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 RPL36AP10-201ENST00000421785 322 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 CDY14P-201ENST00000431260 1014 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGA1P17096 CDY12P-201ENST00000440679 1015 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 CDY13P-201ENST00000445813 1015 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 CDY23P-201ENST00000451661 1014 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 AL445433.1-201ENST00000457507 257 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
HMGA1P17096 RNA5SP49-201ENST00000516450 115 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGA1P17096 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 AC067959.1-201ENST00000604334 379 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 AL354984.3-201ENST00000604803 325 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HMGA1P17096 AL672167.1-205ENST00000641112 3080 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 AC097063.1-201ENST00000426714 1797 ntBASIC4.57□□□□□ -1.68
HMGA1P17096 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HMGA1P17096 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.57□□□□□ -1.68
HMGA1P17096 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HMGA1P17096 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGA1P17096 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HMGA1P17096 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HMGA1P17096 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGA1P17096 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HMGA1P17096 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
HMGA1P17096 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGA1P17096 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
HMGA1P17096 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
HMGA1P17096 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HMGA1P17096 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGA1P17096 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms