Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 DDX18P6-201ENST00000450119 1997 ntBASIC4.87□□□□□ -1.63
CDH1P12830 NXF4-202ENST00000416098 1465 ntBASIC4.87□□□□□ -1.63
CDH1P12830 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.87□□□□□ -1.63
CDH1P12830 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH1P12830 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH1P12830 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH1P12830 NAMPTP1-201ENST00000440465 2514 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH1P12830 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH1P12830 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH1P12830 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH1P12830 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH1P12830 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDH1P12830 MIR16-2-201ENST00000362117 81 ntBASIC4.86□□□□□ -1.63
CDH1P12830 RNA5SP455-201ENST00000365190 119 ntBASIC4.86□□□□□ -1.63
CDH1P12830 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CDH1P12830 SNORA70.10-201ENST00000384515 134 ntBASIC4.86□□□□□ -1.63
CDH1P12830 SNORA66-201ENST00000384792 133 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH1P12830 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH1P12830 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH1P12830 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH1P12830 TXNP5-201ENST00000441043 315 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AL354714.3-201ENST00000447284 493 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH1P12830 TCEA1P1-201ENST00000449716 880 ntBASIC4.86□□□□□ -1.63
CDH1P12830 IGHV5-78-201ENST00000450948 295 ntBASIC4.86□□□□□ -1.63
CDH1P12830 RPL23AP23-201ENST00000452590 471 ntBASIC4.86□□□□□ -1.63
CDH1P12830 RPS3AP53-201ENST00000454716 778 ntBASIC4.86□□□□□ -1.63
CDH1P12830 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH1P12830 AC008410.1-201ENST00000483777 339 ntBASIC4.86□□□□□ -1.63
CDH1P12830 RN7SL441P-201ENST00000492388 296 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.86□□□□□ -1.63
CDH1P12830 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDH1P12830 RFPL4AP5-201ENST00000514977 504 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AC027308.1-201ENST00000517993 110 ntBASIC4.86□□□□□ -1.63
CDH1P12830 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CDH1P12830 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH1P12830 RPL23AP53-201ENST00000521854 457 ntBASIC4.86□□□□□ -1.63
CDH1P12830 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH1P12830 RNU6-84P-201ENST00000607737 102 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AP001033.2-201ENST00000609701 1003 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AP005229.2-201ENST00000609980 697 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AC009163.6-201ENST00000612367 342 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AL627230.1-201ENST00000613077 211 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 AL591926.8-201ENST00000616876 211 ntBASIC4.86□□□□□ -1.63
CDH1P12830 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH1P12830 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH1P12830 BTBD10P1-201ENST00000549824 1352 ntBASIC4.86□□□□□ -1.63
CDH1P12830 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CDH1P12830 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH1P12830 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDH1P12830 MTCO1P15-201ENST00000529569 1526 ntBASIC4.86□□□□□ -1.63
CDH1P12830 Z95327.2-201ENST00000414579 1873 ntBASIC4.86□□□□□ -1.63
CDH1P12830 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH1P12830 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH1P12830 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH1P12830 AC000123.3-201ENST00000624029 4975 ntBASIC4.85□□□□□ -1.63
CDH1P12830 THAP12P4-201ENST00000528321 2266 ntBASIC4.85□□□□□ -1.63
CDH1P12830 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH1P12830 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDH1P12830 RNU4-44P-201ENST00000363050 141 ntBASIC4.85□□□□□ -1.63
CDH1P12830 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH1P12830 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH1P12830 TAF9BP2-201ENST00000400856 499 ntBASIC4.85□□□□□ -1.63
CDH1P12830 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH1P12830 GSTA12P-201ENST00000402398 508 ntBASIC4.85□□□□□ -1.63
CDH1P12830 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.85□□□□□ -1.63
CDH1P12830 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH1P12830 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH1P12830 DPPA2P3-201ENST00000411853 655 ntBASIC4.85□□□□□ -1.63
CDH1P12830 AC106883.1-201ENST00000418805 562 ntBASIC4.85□□□□□ -1.63
CDH1P12830 AL358176.3-201ENST00000420757 454 ntBASIC4.85□□□□□ -1.63
CDH1P12830 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH1P12830 USP12PY-201ENST00000427677 1064 ntBASIC4.85□□□□□ -1.63
CDH1P12830 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH1P12830 MTATP6P17-201ENST00000431030 672 ntBASIC4.85□□□□□ -1.63
CDH1P12830 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH1P12830 RHOT1P3-201ENST00000436571 331 ntBASIC4.85□□□□□ -1.63
CDH1P12830 RPS29P9-201ENST00000440360 171 ntBASIC4.85□□□□□ -1.63
CDH1P12830 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH1P12830 AL591623.2-201ENST00000449978 222 ntBASIC4.85□□□□□ -1.63
CDH1P12830 GYG1P1-201ENST00000460864 698 ntBASIC4.85□□□□□ -1.63
CDH1P12830 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH1P12830 SETP6-201ENST00000479329 568 ntBASIC4.85□□□□□ -1.63
CDH1P12830 AC004815.1-201ENST00000484185 331 ntBASIC4.85□□□□□ -1.63
CDH1P12830 AC093890.1-201ENST00000502554 540 ntBASIC4.85□□□□□ -1.63
CDH1P12830 AC004980.4-201ENST00000513375 203 ntBASIC4.85□□□□□ -1.63
CDH1P12830 RN7SKP46-201ENST00000515942 234 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms