Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.34□□□□□ -1.55
RB1P06400 AC108738.1-201ENST00000603703 237 ntBASIC5.34□□□□□ -1.55
RB1P06400 AL109620.1-201ENST00000618738 1197 ntBASIC5.34□□□□□ -1.55
RB1P06400 AL359757.1-201ENST00000623176 255 ntBASIC5.34□□□□□ -1.55
RB1P06400 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RB1P06400 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RB1P06400 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RB1P06400 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RB1P06400 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.34□□□□□ -1.55
RB1P06400 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RB1P06400 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.34□□□□□ -1.55
RB1P06400 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
RB1P06400 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RB1P06400 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.34□□□□□ -1.56
RB1P06400 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RB1P06400 AL132640.2-201ENST00000559968 1698 ntBASIC5.34□□□□□ -1.56
RB1P06400 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
RB1P06400 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RB1P06400 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RB1P06400 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RB1P06400 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 GVINP1-202ENST00000531871 7271 ntBASIC5.33□□□□□ -1.56
RB1P06400 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RB1P06400 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.33□□□□□ -1.56
RB1P06400 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 ATP5HP3-201ENST00000396994 486 ntBASIC5.33□□□□□ -1.56
RB1P06400 TAF9BP2-201ENST00000400856 499 ntBASIC5.33□□□□□ -1.56
RB1P06400 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.33□□□□□ -1.56
RB1P06400 CACYBPP1-201ENST00000438592 684 ntBASIC5.33□□□□□ -1.56
RB1P06400 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.33□□□□□ -1.56
RB1P06400 RPL23AP23-201ENST00000452590 471 ntBASIC5.33□□□□□ -1.56
RB1P06400 NPM1P17-201ENST00000479221 602 ntBASIC5.33□□□□□ -1.56
RB1P06400 RN7SL814P-201ENST00000487715 300 ntBASIC5.33□□□□□ -1.56
RB1P06400 RPS12P31-201ENST00000491419 398 ntBASIC5.33□□□□□ -1.56
RB1P06400 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 VTA1P2-201ENST00000520205 911 ntBASIC5.33□□□□□ -1.56
RB1P06400 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.33□□□□□ -1.56
RB1P06400 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 CR383656.14-201ENST00000551951 406 ntBASIC5.33□□□□□ -1.56
RB1P06400 AL390334.1-201ENST00000556395 450 ntBASIC5.33□□□□□ -1.56
RB1P06400 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.33□□□□□ -1.56
RB1P06400 EIF1P5-201ENST00000585002 234 ntBASIC5.33□□□□□ -1.56
RB1P06400 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.33□□□□□ -1.56
RB1P06400 AC073137.1-201ENST00000605636 634 ntBASIC5.33□□□□□ -1.56
RB1P06400 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 AC245389.2-201ENST00000616023 576 ntBASIC5.33□□□□□ -1.56
RB1P06400 AC242843.1-201ENST00000618702 573 ntBASIC5.33□□□□□ -1.56
RB1P06400 AC020978.9-201ENST00000624380 1141 ntBASIC5.33□□□□□ -1.56
RB1P06400 AP002371.2-201ENST00000624450 503 ntBASIC5.33□□□□□ -1.56
RB1P06400 AC080188.3-201ENST00000624842 748 ntBASIC5.33□□□□□ -1.56
RB1P06400 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.33□□□□□ -1.56
RB1P06400 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
RB1P06400 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
RB1P06400 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
RB1P06400 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RB1P06400 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RB1P06400 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.33□□□□□ -1.56
RB1P06400 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.32□□□□□ -1.56
RB1P06400 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RB1P06400 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.32□□□□□ -1.56
RB1P06400 TRIM51GP-201ENST00000534741 1350 ntBASIC5.32□□□□□ -1.56
RB1P06400 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 RN7SKP145-201ENST00000363291 303 ntBASIC5.32□□□□□ -1.56
RB1P06400 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RB1P06400 PTGES3P2-201ENST00000407942 482 ntBASIC5.32□□□□□ -1.56
RB1P06400 SNORA77-201ENST00000408716 125 ntBASIC5.32□□□□□ -1.56
RB1P06400 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.32□□□□□ -1.56
RB1P06400 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 CENPIP1-201ENST00000425713 902 ntBASIC5.32□□□□□ -1.56
RB1P06400 RSL24D1P6-201ENST00000426934 401 ntBASIC5.32□□□□□ -1.56
RB1P06400 AC022022.1-201ENST00000430304 178 ntBASIC5.32□□□□□ -1.56
RB1P06400 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.32□□□□□ -1.56
RB1P06400 PTP4A1P3-201ENST00000433661 420 ntBASIC5.32□□□□□ -1.56
RB1P06400 AC090018.1-201ENST00000434369 367 ntBASIC5.32□□□□□ -1.56
RB1P06400 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.32□□□□□ -1.56
RB1P06400 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.32□□□□□ -1.56
RB1P06400 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 AL133244.1-201ENST00000456007 258 ntBASIC5.32□□□□□ -1.56
RB1P06400 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms