Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL3A1P02461 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL3A1P02461 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.07□□□□□ -1.44
COL3A1P02461 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 AP002512.4-202ENST00000641599 4530 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.07□□□□□ -1.44
COL3A1P02461 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 RN7SKP74-201ENST00000362849 309 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 UBBP2-201ENST00000376781 231 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL3A1P02461 AL592293.2-201ENST00000422292 996 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 HMGB3P5-201ENST00000428894 612 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 AL512661.1-201ENST00000434586 1253 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 MRPL48P1-201ENST00000445390 636 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 RPL23AP43-201ENST00000446445 471 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 FCF1P7-201ENST00000451185 558 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 ART2BP-201ENST00000453501 499 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 ATP5G1P3-201ENST00000463301 410 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 AC020937.1-201ENST00000519677 1013 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.07□□□□□ -1.44
COL3A1P02461 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.07□□□□□ -1.44
COL3A1P02461 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.07□□□□□ -1.44
COL3A1P02461 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.07□□□□□ -1.44
COL3A1P02461 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.07□□□□□ -1.44
COL3A1P02461 MTATP6P24-201ENST00000576835 677 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 AC010201.1-201ENST00000605051 540 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 AC087683.2-201ENST00000611384 326 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 AC122108.2-201ENST00000611946 526 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 AC104307.1-201ENST00000616142 196 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 AC018628.1-201ENST00000624147 3819 ntBASIC6.07□□□□□ -1.44
COL3A1P02461 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.07□□□□□ -1.44
COL3A1P02461 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL3A1P02461 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL3A1P02461 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.07□□□□□ -1.44
COL3A1P02461 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL3A1P02461 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.06□□□□□ -1.44
COL3A1P02461 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.06□□□□□ -1.44
COL3A1P02461 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.06□□□□□ -1.44
COL3A1P02461 AC003985.2-201ENST00000562268 1669 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.06□□□□□ -1.44
COL3A1P02461 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 SDHCP2-201ENST00000398565 501 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 RPL21P108-201ENST00000413857 481 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 TMSB10P2-201ENST00000416049 131 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 EIF4A1P1-201ENST00000420241 934 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 RPL21P91-201ENST00000429231 479 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 AL590762.3-201ENST00000436372 640 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.06□□□□□ -1.44
COL3A1P02461 DHFRP3-201ENST00000455595 559 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.06□□□□□ -1.44
COL3A1P02461 RN7SL385P-201ENST00000468873 276 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 RPL21P126-201ENST00000470049 478 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 AC105313.1-201ENST00000509121 353 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.06□□□□□ -1.44
COL3A1P02461 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.06□□□□□ -1.44
COL3A1P02461 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.06□□□□□ -1.44
COL3A1P02461 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.06□□□□□ -1.44
COL3A1P02461 AC073111.2-201ENST00000605657 1075 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 AL512506.1-201ENST00000613918 449 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.06□□□□□ -1.44
COL3A1P02461 AL139254.3-201ENST00000641097 674 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL3A1P02461 AC000374.1-201ENST00000434698 1745 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL3A1P02461 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.06□□□□□ -1.44
COL3A1P02461 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.06□□□□□ -1.44
COL3A1P02461 SAMMSON-210ENST00000641260 1308 ntBASIC6.06□□□□□ -1.44
COL3A1P02461 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL3A1P02461 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL3A1P02461 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL3A1P02461 AC012321.1-201ENST00000561622 1588 ntBASIC6.05□□□□□ -1.44
COL3A1P02461 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL3A1P02461 AL512283.1-201ENST00000606756 1384 ntBASIC6.05□□□□□ -1.44
COL3A1P02461 SALL4P2-201ENST00000423288 2910 ntBASIC6.05□□□□□ -1.44
COL3A1P02461 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms