Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.38□□□□□ -1.55
COL1A1P02452 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.38□□□□□ -1.55
COL1A1P02452 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
COL1A1P02452 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL1A1P02452 RN7SL176P-201ENST00000580352 264 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.38□□□□□ -1.55
COL1A1P02452 SNX18P1Y-201ENST00000616231 511 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 AL445363.3-201ENST00000623080 671 ntBASIC5.38□□□□□ -1.55
COL1A1P02452 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
COL1A1P02452 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
COL1A1P02452 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
COL1A1P02452 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
COL1A1P02452 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 RNU1-132P-201ENST00000364300 164 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL1A1P02452 ARAFP1-201ENST00000422172 605 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.37□□□□□ -1.55
COL1A1P02452 RPS27AP17-201ENST00000463344 455 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.37□□□□□ -1.55
COL1A1P02452 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.37□□□□□ -1.55
COL1A1P02452 ADAD1P2-201ENST00000588476 646 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 AP002360.3-201ENST00000607673 710 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.37□□□□□ -1.55
COL1A1P02452 AC008785.1-201ENST00000624475 456 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 AC090506.2-201ENST00000624521 419 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.37□□□□□ -1.55
COL1A1P02452 OR8B1P-202ENST00000641132 1178 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 LINC01808-202ENST00000641680 1116 ntBASIC5.37□□□□□ -1.55
COL1A1P02452 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.37□□□□□ -1.55
COL1A1P02452 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL1A1P02452 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL1A1P02452 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL1A1P02452 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
COL1A1P02452 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.36□□□□□ -1.55
COL1A1P02452 AL603750.1-201ENST00000624216 1717 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.36□□□□□ -1.55
COL1A1P02452 RN7SKP224-201ENST00000364140 325 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 EI24P3-201ENST00000399046 1062 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 EIF4A1P3-201ENST00000411521 244 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 EIF4A1P1-201ENST00000420241 934 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL1A1P02452 RPL36AP10-201ENST00000421785 322 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 RCC2P2-201ENST00000422174 918 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL1A1P02452 MRPL48P1-201ENST00000445390 636 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 Z95327.1-201ENST00000446082 482 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.36□□□□□ -1.55
COL1A1P02452 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.36□□□□□ -1.55
COL1A1P02452 AP002812.1-201ENST00000495378 474 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 RPS4XP18-201ENST00000495480 763 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.36□□□□□ -1.55
COL1A1P02452 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.36□□□□□ -1.55
COL1A1P02452 RN7SL435P-201ENST00000584418 282 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.36□□□□□ -1.55
COL1A1P02452 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.36□□□□□ -1.55
COL1A1P02452 AL049840.6-202ENST00000603373 279 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 AC138965.3-201ENST00000623875 498 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 AL139254.3-201ENST00000641097 674 ntBASIC5.36□□□□□ -1.55
COL1A1P02452 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL1A1P02452 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL1A1P02452 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
COL1A1P02452 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL1A1P02452 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL1A1P02452 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.35□□□□□ -1.55
COL1A1P02452 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL1A1P02452 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL1A1P02452 AL158163.1-201ENST00000603915 1649 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL1A1P02452 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
COL1A1P02452 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL1A1P02452 AL359837.1-201ENST00000381357 287 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.35□□□□□ -1.55
COL1A1P02452 AL161909.1-201ENST00000397390 712 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 OR8G2P-201ENST00000412796 908 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 OR13Z1P-201ENST00000416141 834 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL1A1P02452 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.35□□□□□ -1.55
COL1A1P02452 AL132765.1-201ENST00000434165 553 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 UBE2V1P3-201ENST00000439651 417 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 AC114495.1-201ENST00000441274 436 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.35□□□□□ -1.55
COL1A1P02452 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.35□□□□□ -1.55
COL1A1P02452 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.35□□□□□ -1.55
COL1A1P02452 OR8R1P-201ENST00000543943 764 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.35□□□□□ -1.55
COL1A1P02452 uc_338.13-201ENST00000618243 179 ntBASIC5.35□□□□□ -1.55
COL1A1P02452 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.35□□□□□ -1.55
COL1A1P02452 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL1A1P02452 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL1A1P02452 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms