Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.52□□□□□ -1.69
HCN1O60741 RNU6-751P-201ENST00000516382 101 ntBASIC4.52□□□□□ -1.69
HCN1O60741 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.52□□□□□ -1.69
HCN1O60741 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.52□□□□□ -1.69
HCN1O60741 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.52□□□□□ -1.69
HCN1O60741 MIR4737-201ENST00000583979 81 ntBASIC4.52□□□□□ -1.69
HCN1O60741 EIF1P5-201ENST00000585002 234 ntBASIC4.52□□□□□ -1.69
HCN1O60741 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.52□□□□□ -1.69
HCN1O60741 AC133552.5-201ENST00000604266 540 ntBASIC4.52□□□□□ -1.69
HCN1O60741 AC005377.1-201ENST00000605126 456 ntBASIC4.52□□□□□ -1.69
HCN1O60741 MIR6820-201ENST00000611508 62 ntBASIC4.52□□□□□ -1.69
HCN1O60741 AC021106.3-201ENST00000623925 531 ntBASIC4.52□□□□□ -1.69
HCN1O60741 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 OR51H2P-202ENST00000641424 3046 ntBASIC4.52□□□□□ -1.69
HCN1O60741 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HCN1O60741 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HCN1O60741 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.52□□□□□ -1.69
HCN1O60741 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
HCN1O60741 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HCN1O60741 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HCN1O60741 DDX18P5-201ENST00000534547 1306 ntBASIC4.51□□□□□ -1.69
HCN1O60741 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HCN1O60741 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HCN1O60741 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HCN1O60741 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HCN1O60741 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HCN1O60741 RNA5SP443-201ENST00000363083 132 ntBASIC4.51□□□□□ -1.69
HCN1O60741 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
HCN1O60741 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HCN1O60741 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.51□□□□□ -1.69
HCN1O60741 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.51□□□□□ -1.69
HCN1O60741 AF186996.5-201ENST00000418098 904 ntBASIC4.51□□□□□ -1.69
HCN1O60741 MTND4LP13-201ENST00000425022 298 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.51□□□□□ -1.69
HCN1O60741 AC007559.1-201ENST00000428736 355 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.51□□□□□ -1.69
HCN1O60741 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.51□□□□□ -1.69
HCN1O60741 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.51□□□□□ -1.69
HCN1O60741 MTND2P2-201ENST00000434633 945 ntBASIC4.51□□□□□ -1.69
HCN1O60741 CASP3P1-201ENST00000446037 609 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.51□□□□□ -1.69
HCN1O60741 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.51□□□□□ -1.69
HCN1O60741 OR52J1P-201ENST00000450596 932 ntBASIC4.51□□□□□ -1.69
HCN1O60741 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.51□□□□□ -1.69
HCN1O60741 RPS6P2-201ENST00000454208 705 ntBASIC4.51□□□□□ -1.69
HCN1O60741 RPS17P2-201ENST00000461663 408 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC022336.1-201ENST00000475510 337 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.51□□□□□ -1.69
HCN1O60741 AC021146.3-201ENST00000511911 260 ntBASIC4.51□□□□□ -1.69
HCN1O60741 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HCN1O60741 Y_RNA.719-201ENST00000517156 106 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.51□□□□□ -1.69
HCN1O60741 IGKV1-32-201ENST00000519290 311 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC134698.5-201ENST00000519444 336 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.51□□□□□ -1.69
HCN1O60741 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.51□□□□□ -1.69
HCN1O60741 AC022882.1-201ENST00000532142 501 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC104687.2-201ENST00000604442 342 ntBASIC4.51□□□□□ -1.69
HCN1O60741 BNIP3P7-201ENST00000605641 516 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AL049794.2-201ENST00000616301 365 ntBASIC4.51□□□□□ -1.69
HCN1O60741 AC009704.2-201ENST00000618739 483 ntBASIC4.51□□□□□ -1.69
HCN1O60741 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HCN1O60741 IRF5P1-201ENST00000504852 2164 ntBASIC4.51□□□□□ -1.69
HCN1O60741 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HCN1O60741 MTCO1P8-201ENST00000416914 1523 ntBASIC4.51□□□□□ -1.69
HCN1O60741 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HCN1O60741 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HCN1O60741 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.5□□□□□ -1.69
HCN1O60741 ASNSP1-201ENST00000518311 1939 ntBASIC4.5□□□□□ -1.69
HCN1O60741 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.5□□□□□ -1.69
HCN1O60741 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HCN1O60741 HSPD1P11-201ENST00000508643 1702 ntBASIC4.5□□□□□ -1.69
HCN1O60741 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN1O60741 AC244453.4-201ENST00000419150 388 ntBASIC4.5□□□□□ -1.69
HCN1O60741 AC092570.3-201ENST00000420113 693 ntBASIC4.5□□□□□ -1.69
HCN1O60741 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN1O60741 AC008072.1-201ENST00000434254 824 ntBASIC4.5□□□□□ -1.69
HCN1O60741 Z85994.2-201ENST00000434327 452 ntBASIC4.5□□□□□ -1.69
HCN1O60741 NMNAT1P2-201ENST00000435192 860 ntBASIC4.5□□□□□ -1.69
HCN1O60741 AC097523.2-201ENST00000435551 652 ntBASIC4.5□□□□□ -1.69
HCN1O60741 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.5□□□□□ -1.69
HCN1O60741 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.5□□□□□ -1.69
HCN1O60741 MRPL48P1-201ENST00000445390 636 ntBASIC4.5□□□□□ -1.69
HCN1O60741 SLC25A18P1-201ENST00000449385 454 ntBASIC4.5□□□□□ -1.69
HCN1O60741 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.5□□□□□ -1.69
HCN1O60741 APOOP2-201ENST00000461561 539 ntBASIC4.5□□□□□ -1.69
HCN1O60741 AC007686.1-201ENST00000488511 463 ntBASIC4.5□□□□□ -1.69
HCN1O60741 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.5□□□□□ -1.69
HCN1O60741 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN1O60741 GCSHP4-201ENST00000538792 439 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms