Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MTCYBP13-201ENST00000578634 1093 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.15□□□□□ -1.59
SMAD6O43541 AC010503.3-201ENST00000594355 540 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 MEMO1P5-201ENST00000604810 406 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AC023813.4-201ENST00000607580 580 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AC084036.1-201ENST00000609190 508 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 AC122108.2-201ENST00000611946 526 ntBASIC5.15□□□□□ -1.59
SMAD6O43541 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.15□□□□□ -1.59
SMAD6O43541 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
SMAD6O43541 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SMAD6O43541 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
SMAD6O43541 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMAD6O43541 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMAD6O43541 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMAD6O43541 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMAD6O43541 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SMAD6O43541 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMAD6O43541 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMAD6O43541 ZNF29P-201ENST00000225587 168 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMAD6O43541 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.14□□□□□ -1.59
SMAD6O43541 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMAD6O43541 RN7SKP95-201ENST00000362860 303 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 RNU6-618P-201ENST00000363518 112 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 RN7SKP113-201ENST00000363891 295 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 RNU6-650P-201ENST00000365658 111 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMAD6O43541 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMAD6O43541 SNORA66-201ENST00000384792 133 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMAD6O43541 HNRNPDP2-201ENST00000406475 478 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 HYALP1-201ENST00000417674 1279 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 MTCYBP7-201ENST00000419540 1134 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.14□□□□□ -1.59
SMAD6O43541 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.14□□□□□ -1.59
SMAD6O43541 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.14□□□□□ -1.59
SMAD6O43541 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.14□□□□□ -1.59
SMAD6O43541 TCEA1P1-201ENST00000449716 880 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 GAPDHP14-201ENST00000450472 937 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.14□□□□□ -1.59
SMAD6O43541 AL133244.1-201ENST00000456007 258 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 RPS4XP12-201ENST00000461747 709 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC016559.2-201ENST00000510759 359 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.14□□□□□ -1.59
SMAD6O43541 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.14□□□□□ -1.59
SMAD6O43541 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.14□□□□□ -1.59
SMAD6O43541 SULT1C2P2-201ENST00000562517 294 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC011840.5-201ENST00000582125 771 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.14□□□□□ -1.59
SMAD6O43541 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 AC091057.2-201ENST00000602594 792 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.14□□□□□ -1.59
SMAD6O43541 AC004948.1-201ENST00000609858 672 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC091905.4-201ENST00000623432 202 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 AC138965.3-201ENST00000623875 498 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMAD6O43541 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMAD6O43541 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMAD6O43541 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
SMAD6O43541 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.14□□□□□ -1.59
SMAD6O43541 AC007996.1-201ENST00000620414 2821 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 THAP12P8-201ENST00000447914 2115 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 INTS6P1-201ENST00000504674 2530 ntBASIC5.14□□□□□ -1.59
SMAD6O43541 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 VPS35P1-201ENST00000563400 1518 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 AC003985.2-201ENST00000562268 1669 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 RNU6-1331P-201ENST00000363658 106 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AL035079.1-201ENST00000405210 287 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 SNORA77-201ENST00000408716 125 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC016769.2-201ENST00000414815 475 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.13□□□□□ -1.59
SMAD6O43541 RPS27P18-201ENST00000431701 247 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 RPL7P34-201ENST00000433316 712 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms