Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AP003476.1-201ENST00000623984 516 ntBASIC4.79□□□□□ -1.64
TO15178 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.79□□□□□ -1.64
TO15178 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TO15178 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.79□□□□□ -1.64
TO15178 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TO15178 MAPK10-304ENST00000641341 3984 ntBASIC4.79□□□□□ -1.64
TO15178 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
TO15178 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
TO15178 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.79□□□□□ -1.64
TO15178 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.78□□□□□ -1.64
TO15178 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TO15178 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TO15178 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TO15178 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TO15178 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.78□□□□□ -1.64
TO15178 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TO15178 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TO15178 MIR320B1-201ENST00000390209 79 ntBASIC4.78□□□□□ -1.64
TO15178 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TO15178 RN7SKP222-201ENST00000410651 315 ntBASIC4.78□□□□□ -1.64
TO15178 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.78□□□□□ -1.64
TO15178 COX5BP7-201ENST00000414780 274 ntBASIC4.78□□□□□ -1.64
TO15178 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.78□□□□□ -1.64
TO15178 BX510359.3-201ENST00000422168 306 ntBASIC4.78□□□□□ -1.64
TO15178 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.78□□□□□ -1.64
TO15178 AL139148.1-201ENST00000427122 680 ntBASIC4.78□□□□□ -1.64
TO15178 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.78□□□□□ -1.64
TO15178 YWHAZP2-201ENST00000440317 728 ntBASIC4.78□□□□□ -1.64
TO15178 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.78□□□□□ -1.64
TO15178 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.78□□□□□ -1.64
TO15178 HMGB1P26-201ENST00000452520 628 ntBASIC4.78□□□□□ -1.64
TO15178 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.78□□□□□ -1.64
TO15178 AC009127.1-201ENST00000467090 155 ntBASIC4.78□□□□□ -1.64
TO15178 RPL21P6-201ENST00000479171 504 ntBASIC4.78□□□□□ -1.64
TO15178 RN7SL727P-201ENST00000482164 296 ntBASIC4.78□□□□□ -1.64
TO15178 RPL21P47-201ENST00000483696 477 ntBASIC4.78□□□□□ -1.64
TO15178 RN7SL629P-201ENST00000489622 285 ntBASIC4.78□□□□□ -1.64
TO15178 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.78□□□□□ -1.64
TO15178 NPM1P6-201ENST00000521088 871 ntBASIC4.78□□□□□ -1.64
TO15178 AC022832.1-201ENST00000530718 645 ntBASIC4.78□□□□□ -1.64
TO15178 PDCD5P1-201ENST00000543528 309 ntBASIC4.78□□□□□ -1.64
TO15178 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.78□□□□□ -1.64
TO15178 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.78□□□□□ -1.64
TO15178 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.78□□□□□ -1.64
TO15178 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.78□□□□□ -1.64
TO15178 AC106734.1-201ENST00000568646 663 ntBASIC4.78□□□□□ -1.64
TO15178 AC022884.2-201ENST00000578535 580 ntBASIC4.78□□□□□ -1.64
TO15178 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.78□□□□□ -1.64
TO15178 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.78□□□□□ -1.64
TO15178 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.78□□□□□ -1.64
TO15178 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.78□□□□□ -1.64
TO15178 BNIP3P35-201ENST00000604530 490 ntBASIC4.78□□□□□ -1.64
TO15178 AC018618.2-201ENST00000604770 446 ntBASIC4.78□□□□□ -1.64
TO15178 AC021851.1-201ENST00000608537 1082 ntBASIC4.78□□□□□ -1.64
TO15178 AC091932.2-201ENST00000623014 291 ntBASIC4.78□□□□□ -1.64
TO15178 AC099494.2-201ENST00000623371 978 ntBASIC4.78□□□□□ -1.64
TO15178 AP002505.2-201ENST00000623585 696 ntBASIC4.78□□□□□ -1.64
TO15178 AC093875.1-201ENST00000623688 504 ntBASIC4.78□□□□□ -1.64
TO15178 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.78□□□□□ -1.64
TO15178 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.78□□□□□ -1.64
TO15178 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.78□□□□□ -1.64
TO15178 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TO15178 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TO15178 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.78□□□□□ -1.64
TO15178 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TO15178 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TO15178 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
TO15178 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TO15178 CASC19-204ENST00000641001 2055 ntBASIC4.77□□□□□ -1.65
TO15178 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TO15178 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
TO15178 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.77□□□□□ -1.65
TO15178 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.77□□□□□ -1.65
TO15178 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TO15178 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TO15178 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.77□□□□□ -1.65
TO15178 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TO15178 MIR142-201ENST00000384835 87 ntBASIC4.77□□□□□ -1.65
TO15178 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TO15178 U3.36-201ENST00000408418 213 ntBASIC4.77□□□□□ -1.65
TO15178 HYALP1-201ENST00000417674 1279 ntBASIC4.77□□□□□ -1.65
TO15178 AC048351.1-201ENST00000420064 602 ntBASIC4.77□□□□□ -1.65
TO15178 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TO15178 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.77□□□□□ -1.65
TO15178 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.77□□□□□ -1.65
TO15178 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.77□□□□□ -1.65
TO15178 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.77□□□□□ -1.65
TO15178 AL096829.2-201ENST00000446582 742 ntBASIC4.77□□□□□ -1.65
TO15178 AC092685.1-201ENST00000447960 1243 ntBASIC4.77□□□□□ -1.65
TO15178 PRPF38AP1-201ENST00000451976 933 ntBASIC4.77□□□□□ -1.65
TO15178 RNA5SP103-201ENST00000459503 118 ntBASIC4.77□□□□□ -1.65
TO15178 ATP5G1P3-201ENST00000463301 410 ntBASIC4.77□□□□□ -1.65
TO15178 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.77□□□□□ -1.65
TO15178 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.77□□□□□ -1.65
TO15178 AC006499.3-201ENST00000506077 748 ntBASIC4.77□□□□□ -1.65
TO15178 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 273.2 ms