Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL391987.1-201ENST00000441025 200 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AL591363.1-201ENST00000450091 483 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC092647.2-201ENST00000452998 253 ntBASIC5□□□□□ -1.61
CCDC188H7C350 RPL10P17-201ENST00000453852 316 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5□□□□□ -1.61
CCDC188H7C350 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5□□□□□ -1.61
CCDC188H7C350 RN7SL41P-201ENST00000476144 297 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC108729.2-201ENST00000476543 840 ntBASIC5□□□□□ -1.61
CCDC188H7C350 SYT14P1-201ENST00000481459 721 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5□□□□□ -1.61
CCDC188H7C350 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 RN7SKP141-201ENST00000516167 338 ntBASIC5□□□□□ -1.61
CCDC188H7C350 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5□□□□□ -1.61
CCDC188H7C350 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5□□□□□ -1.61
CCDC188H7C350 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 AL049839.1-201ENST00000556151 657 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC233266.2-201ENST00000567067 528 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC073137.1-201ENST00000605636 634 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AC025175.1-201ENST00000606482 759 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AL023583.1-201ENST00000607518 1143 ntBASIC5□□□□□ -1.61
CCDC188H7C350 AL353600.1-201ENST00000608148 251 ntBASIC5□□□□□ -1.61
CCDC188H7C350 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC188H7C350 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5□□□□□ -1.61
CCDC188H7C350 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC188H7C350 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC188H7C350 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC188H7C350 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC188H7C350 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5□□□□□ -1.61
CCDC188H7C350 SOCS5P3-201ENST00000425115 1576 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC188H7C350 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC188H7C350 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC188H7C350 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC188H7C350 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC188H7C350 HSPD1P14-201ENST00000432666 1618 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC188H7C350 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC188H7C350 RNU2-50P-201ENST00000410494 143 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC188H7C350 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 RPL34P20-201ENST00000442771 351 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC188H7C350 NPM1P39-201ENST00000449818 867 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC002553.2-201ENST00000453217 340 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 MTND2P6-201ENST00000455337 1030 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC188H7C350 RN7SL222P-201ENST00000476452 299 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 RPL21P6-201ENST00000479171 504 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 RPL7P39-201ENST00000481157 744 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 HMGN2P25-201ENST00000486956 268 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 RN7SL214P-201ENST00000487317 265 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC108022.1-201ENST00000493466 478 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC188H7C350 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC188H7C350 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC188H7C350 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC188H7C350 OSBPL9P3-201ENST00000534523 595 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC008083.2-201ENST00000546707 476 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC093014.1-201ENST00000548926 724 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC188H7C350 NPM1P47-201ENST00000560843 856 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 AC015912.2-201ENST00000571053 181 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC209154.1-201ENST00000582156 337 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC188H7C350 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC188H7C350 AC092474.3-201ENST00000603022 568 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC119501.1-201ENST00000603646 475 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC135178.6-201ENST00000605314 398 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AL121932.1-201ENST00000605542 214 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AL139407.1-201ENST00000613826 1175 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC011472.4-201ENST00000615848 491 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AC126175.1-201ENST00000617041 758 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AL645927.2-201ENST00000618350 349 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AL022401.1-201ENST00000619498 108 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 AL359757.1-201ENST00000623176 255 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC188H7C350 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC188H7C350 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 LINC01355-201ENST00000566551 5444 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 AC021242.1-201ENST00000507315 2035 ntBASIC4.99□□□□□ -1.61
CCDC188H7C350 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC188H7C350 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC188H7C350 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC188H7C350 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms