Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AL137918.1-201ENST00000624542 1922 ntBASIC5.66□□□□□ -1.5
RGPD3A6NKT7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AL591135.1-201ENST00000401578 5914 ntBASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AP000357.1-201ENST00000409926 1165 ntBASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AC114814.2-201ENST00000419195 485 ntBASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 RNA5SP49-201ENST00000516450 115 ntBASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 NPM1P5-201ENST00000557228 838 ntBASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AC015912.2-201ENST00000571053 181 ntBASIC5.66□□□□□ -1.5
RGPD3A6NKT7 BPIFA4P-203ENST00000603168 689 ntBASIC5.66□□□□□ -1.5
RGPD3A6NKT7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 SNORA5.1-201ENST00000384275 131 ntBASIC5.65□□□□□ -1.5
RGPD3A6NKT7 MFSD13B-201ENST00000420133 1290 ntBASIC5.65□□□□□ -1.5
RGPD3A6NKT7 NOTCH2P1-201ENST00000443481 624 ntBASIC5.65□□□□□ -1.5
RGPD3A6NKT7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 AC006499.5-201ENST00000505037 514 ntBASIC5.65□□□□□ -1.5
RGPD3A6NKT7 PARP4P3-201ENST00000510265 317 ntBASIC5.65□□□□□ -1.5
RGPD3A6NKT7 AC119751.5-201ENST00000514077 770 ntBASIC5.65□□□□□ -1.5
RGPD3A6NKT7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RGPD3A6NKT7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 RLIMP1-201ENST00000339626 1680 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 MIR133A2-201ENST00000347538 102 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 RNU1-14P-201ENST00000362759 152 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 MIR491-201ENST00000384877 84 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 RN7SKP235-201ENST00000410662 305 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 IFITM8P-201ENST00000522529 394 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 FKBP1BP1-201ENST00000553366 325 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 MIR4660-201ENST00000583549 74 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 MIR7151-201ENST00000617477 60 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RGPD3A6NKT7 AC099654.3-201ENST00000447087 1546 ntBASIC5.65□□□□□ -1.51
RGPD3A6NKT7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 OR8F1P-201ENST00000425243 930 ntBASIC5.64□□□□□ -1.51
RGPD3A6NKT7 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 AC010460.1-201ENST00000507087 466 ntBASIC5.64□□□□□ -1.51
RGPD3A6NKT7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 AC007546.1-201ENST00000619452 559 ntBASIC5.64□□□□□ -1.51
RGPD3A6NKT7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 LINC01808-202ENST00000641680 1116 ntBASIC5.64□□□□□ -1.51
RGPD3A6NKT7 AC009093.8-201ENST00000641769 292 ntBASIC5.64□□□□□ -1.51
RGPD3A6NKT7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 SCARNA15-201ENST00000607520 4325 ntBASIC5.64□□□□□ -1.51
RGPD3A6NKT7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RGPD3A6NKT7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms