Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 GTF2H2B-203ENST00000508065 1432 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 CASC19-206ENST00000641028 1430 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC112198.2-201ENST00000426589 6996 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 BRAFP1-201ENST00000445336 2703 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 Y_RNA.77-201ENST00000362962 107 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 RPS3AP26-201ENST00000398259 784 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 PTP4A1P1-201ENST00000420539 515 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC004074.1-201ENST00000421810 1063 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 RPL21P43-201ENST00000425440 472 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 FTH1P16-201ENST00000435241 552 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AL445928.1-201ENST00000435545 222 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 ARL5AP2-201ENST00000444698 533 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 SEPT7P3-201ENST00000455017 621 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AP002453.1-201ENST00000492327 668 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC008629.2-201ENST00000503783 483 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC093755.1-201ENST00000512950 1023 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 RN7SKP70-201ENST00000516655 271 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 RNA5SP441-201ENST00000516809 88 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 RFPL1S-203ENST00000539579 330 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC044913.1-201ENST00000557200 430 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 MIR3912-201ENST00000577566 105 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AL512652.1-201ENST00000619006 500 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 Z69908.1-201ENST00000622603 247 ntBASIC6.18□□□□□ -1.42
CCDC66A2RUB6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC66A2RUB6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AC007938.2-201ENST00000604666 2634 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 ADAM5-202ENST00000399789 1942 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AC083843.3-201ENST00000623679 2186 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 RNU1-65P-201ENST00000363919 148 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 RNU6-553P-201ENST00000364047 96 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 MIR525-201ENST00000384978 85 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AL590084.2-201ENST00000401481 382 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 SNRPEP6-201ENST00000407465 277 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AC098592.1-201ENST00000419352 333 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 NPM1P22-201ENST00000427761 952 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 MTND1P34-201ENST00000438556 671 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AL354941.1-201ENST00000438600 464 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AL138899.2-201ENST00000439139 499 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 ELOCP8-201ENST00000439309 332 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 MTCYBP34-201ENST00000439552 670 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 ELOCP15-201ENST00000442090 332 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AL929288.2-201ENST00000446368 407 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 RANP1-206ENST00000455094 651 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 RNU1-88P-201ENST00000459274 128 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AC104339.1-201ENST00000465478 348 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AC006539.1-201ENST00000481419 501 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AC112484.3-201ENST00000505910 329 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AP000619.3-201ENST00000535634 1127 ntBASIC6.17□□□□□ -1.42
CCDC66A2RUB6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC66A2RUB6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms