Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC087683.2-201ENST00000611384 326 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC011472.4-201ENST00000615848 491 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AL121890.3-201ENST00000618494 516 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV7S3A2A0A539 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SKP74-201ENST00000362849 309 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SKP113-201ENST00000363891 295 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 MIR137-201ENST00000385223 102 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AL603865.2-201ENST00000401679 213 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 OR51B3P-201ENST00000412287 913 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 XKRYP1-201ENST00000423438 492 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 XKRYP2-201ENST00000432915 492 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 MTCO1P52-201ENST00000433928 531 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 USP9YP24-201ENST00000434374 697 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 OR52B5P-201ENST00000435337 951 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC073052.1-201ENST00000440417 714 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 USP9YP17-201ENST00000444617 696 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC092647.2-201ENST00000452998 253 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 METTL15P1-201ENST00000481421 1045 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC010350.1-201ENST00000504908 231 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC113420.1-201ENST00000507903 571 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 OR10V3P-201ENST00000525712 725 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 LRRC34P1-201ENST00000542742 915 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC234772.3-201ENST00000602277 528 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC024060.1-201ENST00000607052 494 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AL356274.1-201ENST00000617064 410 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC015660.5-201ENST00000623238 564 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC011815.3-201ENST00000624194 473 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 OR52B5P-202ENST00000641118 1110 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 OR8A1-204ENST00000642111 1145 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 STX3-208ENST00000641815 3236 ntBASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
TCRBV7S3A2A0A539 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 SNORA70.10-201ENST00000384515 134 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 MIR142-201ENST00000384835 87 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-1320P-201ENST00000390838 107 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-244P-201ENST00000391028 104 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-1269P-201ENST00000391139 107 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC104297.1-201ENST00000393779 870 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RPL23AP59-201ENST00000399415 461 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RPL7P27-201ENST00000403775 720 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms