Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AL049874.4-201ENST00000557593 255 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 MIR4691-201ENST00000583764 85 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC093799.2-201ENST00000610062 578 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 AC019206.1-201ENST00000621938 425 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 SCN1A-220ENST00000641603 12506 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 OR14L1P-202ENST00000641545 3009 ntBASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDD3Q9Y3P4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 U8.4-201ENST00000363626 134 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 Z97832.1-201ENST00000402490 328 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 BTF3P9-201ENST00000418784 283 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 GAPDHP49-201ENST00000421421 961 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 FABP7P1-201ENST00000424004 391 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC092162.1-201ENST00000432828 434 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 EEF1B2P5-201ENST00000444820 548 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 MRPL48P1-201ENST00000445390 636 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 C1DP3-201ENST00000455013 423 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AL356390.1-201ENST00000455684 397 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC005532.2-201ENST00000467154 373 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 RNU6-347P-201ENST00000516658 105 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 OR10G5P-201ENST00000532733 358 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 TVP23CP2-201ENST00000571473 623 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AC087783.2-201ENST00000605070 562 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 SNORD91B-202ENST00000608459 222 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 AL512624.1-201ENST00000613638 469 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.23□□□□□ -1.73
RHBDD3Q9Y3P4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 DDX18P5-201ENST00000534547 1306 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC092642.1-201ENST00000392417 425 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AL021331.1-201ENST00000402817 582 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AL357515.1-201ENST00000402967 542 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ARL4AP5-201ENST00000404372 599 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 RPA2P2-201ENST00000419698 796 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC006065.1-201ENST00000422539 802 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC073464.3-201ENST00000422564 712 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 IPMKP1-201ENST00000425988 855 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 VN1R48P-201ENST00000448149 1036 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 MYO5BP2-201ENST00000449815 1277 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 RN7SL727P-201ENST00000482164 296 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC005912.1-201ENST00000495392 255 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms