Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RPS15AP12-201ENST00000419498 388 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC006457.1-201ENST00000420733 392 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC003071.2-201ENST00000423857 315 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC239860.1-201ENST00000444680 1270 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC073910.1-201ENST00000445047 438 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC087385.2-201ENST00000477729 498 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC079080.1-201ENST00000479841 822 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 Y_RNA.654-201ENST00000497848 106 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC022296.2-201ENST00000512424 202 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 RNU7-51P-201ENST00000516560 62 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 RNA5SP337-201ENST00000517007 109 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC090136.1-201ENST00000520009 240 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC018992.1-201ENST00000523778 2149 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 HSPE1P20-201ENST00000538133 289 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 LINC00674-202ENST00000590734 160 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 HMGB2P1-201ENST00000591146 634 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC104763.2-201ENST00000604179 382 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 Z82243.1-201ENST00000609432 473 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 MIR6751-201ENST00000610479 63 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 SDR42E1P2-201ENST00000614861 481 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AP003789.1-201ENST00000617737 605 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 SDR42E1P4-201ENST00000620894 481 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 COL6A4P1-202ENST00000487147 4317 ntBASIC7.65□□□□□ -1.19
VPS9D1Q9Y2B5 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.65□□□□□ -1.19
VPS9D1Q9Y2B5 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.65□□□□□ -1.19
VPS9D1Q9Y2B5 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
VPS9D1Q9Y2B5 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
VPS9D1Q9Y2B5 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC104966.1-201ENST00000467010 1464 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC235565.1-201ENST00000456962 1325 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 Y_RNA.367-201ENST00000365544 101 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 MIR555-201ENST00000384987 96 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 GAPDHP73-201ENST00000423411 1007 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 RBMY2JP-201ENST00000425544 1059 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC137499.1-201ENST00000427602 88 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC093716.1-201ENST00000435923 377 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC011816.1-201ENST00000441346 546 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC112492.4-201ENST00000456549 352 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 RN7SL392P-201ENST00000473024 299 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 PSMA2P2-201ENST00000504319 686 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC109811.2-201ENST00000509609 452 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 AP006587.2-201ENST00000530696 493 ntBASIC7.64□□□□□ -1.19
VPS9D1Q9Y2B5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms