Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 MAPK10-320ENST00000641462 6696 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AL136116.2-201ENST00000404020 785 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 NPM1P40-201ENST00000412758 733 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AL590806.1-201ENST00000415818 853 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC119751.6-201ENST00000416712 186 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC004074.1-201ENST00000421810 1063 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC007559.1-201ENST00000428736 355 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 ELOCP3-201ENST00000439303 348 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 ARL5AP3-201ENST00000439327 386 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC011753.3-201ENST00000443436 406 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 RN7SL481P-201ENST00000477764 299 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC012339.2-201ENST00000523996 453 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 OR7E10P-201ENST00000526420 991 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AL512310.9-201ENST00000553311 948 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC092868.3-201ENST00000560515 784 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC233702.9-201ENST00000581528 203 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC020910.3-201ENST00000603701 874 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AL008729.2-201ENST00000606393 473 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 AC023813.4-201ENST00000607580 580 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 MIR6810-201ENST00000622701 70 ntBASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA1Q9UND3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 SNORA73.1-201ENST00000363107 205 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 RNA5SP505-201ENST00000364748 108 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 RN7SKP97-201ENST00000410966 333 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC244453.4-201ENST00000419150 388 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC093414.1-201ENST00000434712 514 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 RPS29P9-201ENST00000440360 171 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 GTF3AP5-201ENST00000442645 697 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC234781.3-201ENST00000452540 973 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AL691482.1-201ENST00000453255 87 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 RN7SL354P-201ENST00000469282 294 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC073073.1-201ENST00000493920 463 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC093720.1-201ENST00000505681 714 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC104997.1-201ENST00000519761 717 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AP001880.2-201ENST00000538233 448 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 TVP23CP2-201ENST00000571473 623 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AL512782.1-201ENST00000603093 364 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC084373.1-201ENST00000603311 235 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AC008745.1-201ENST00000604064 271 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AL391358.1-201ENST00000605342 190 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 MIR378J-201ENST00000611988 109 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 AL121950.1-201ENST00000624993 2077 ntBASIC4.49□□□□□ -1.69
NPIPA1Q9UND3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AC110792.3-201ENST00000595906 1614 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 AC079741.1-201ENST00000321498 212 ntBASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.48□□□□□ -1.69
NPIPA1Q9UND3 LRRC37BP1-201ENST00000398851 714 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms