Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 RNU1-6P-201ENST00000516290 144 ntBASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 GSTP1P1-201ENST00000548078 319 ntBASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 AC021106.3-201ENST00000623925 531 ntBASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLIP2Q9UDT6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.59□□□□□ -1.52
CLIP2Q9UDT6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.52
CLIP2Q9UDT6 AC007382.1-201ENST00000624376 2618 ntBASIC5.59□□□□□ -1.52
CLIP2Q9UDT6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AL672167.2-201ENST00000377164 879 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RNU6-1320P-201ENST00000390838 107 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RNU6-1269P-201ENST00000391139 107 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AL049697.2-201ENST00000403708 294 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AP000580.1-201ENST00000404439 358 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AL355994.1-201ENST00000424379 260 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AC009220.1-201ENST00000451614 275 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RNU6-599P-201ENST00000459383 107 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RNU6-1193P-201ENST00000459461 107 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 HMGB1P19-201ENST00000517578 577 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RN7SL652P-201ENST00000577769 300 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RN7SL690P-201ENST00000582087 240 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AC209154.1-201ENST00000582156 337 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AC073091.2-201ENST00000603205 907 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 SNORA35B-201ENST00000607417 129 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RNU6-368P-201ENST00000620928 107 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RNU6-538P-201ENST00000622329 107 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AC012414.7-202ENST00000622705 1090 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AC010435.1-201ENST00000623353 1177 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 AC107021.2-201ENST00000567714 2095 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 RLIMP2-201ENST00000427891 1563 ntBASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLIP2Q9UDT6 CASC19-206ENST00000641028 1430 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 MTCO1P22-201ENST00000604619 1360 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC010132.2-201ENST00000295493 1043 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 RNU1-32P-201ENST00000363937 159 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 RNA5SP332-201ENST00000391063 115 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 SNORA68.2-201ENST00000391263 128 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AL592291.1-201ENST00000403830 352 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 HMGB1P32-201ENST00000425971 565 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC107015.1-201ENST00000466902 747 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC113398.2-201ENST00000507630 558 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC092593.2-201ENST00000513866 913 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AL110118.1-201ENST00000553543 400 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 MIR4675-201ENST00000577898 77 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC068790.4-201ENST00000602474 263 ntBASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 SNORD91B-202ENST00000608459 222 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms