Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC239868.2-201ENST00000564237 4527 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 ZNF833P-201ENST00000424938 1494 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC100871.1-201ENST00000507871 1456 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 TMSB4XP2-201ENST00000335179 210 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 NRBF2P2-201ENST00000413087 861 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 RAD23BP2-201ENST00000416003 1207 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 RPS4XP5-201ENST00000419038 768 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 DPY19L1P2-201ENST00000426647 915 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 RPL7P29-201ENST00000437151 728 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC009263.1-201ENST00000441193 1239 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 ARL5AP2-201ENST00000444698 533 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 HMGN1P2-201ENST00000445197 310 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 LTV1P1-201ENST00000510683 1237 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 RNU2-30P-201ENST00000516209 141 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 Y_RNA.667-201ENST00000516212 107 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 RNA5SP438-201ENST00000516561 112 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AP000648.1-201ENST00000529682 397 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC022880.1-201ENST00000534017 973 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AL356121.2-201ENST00000624715 780 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC127502.3-201ENST00000636170 1206 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 MIR1910-201ENST00000636955 80 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AL355852.1-201ENST00000454081 1771 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 AC015689.2-201ENST00000528172 1738 ntBASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PPARGC1AQ9UBK2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 UGT2B26P-201ENST00000508672 1613 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AC011477.1-204ENST00000623416 1325 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 Y_RNA.553-201ENST00000384670 102 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AC104297.1-201ENST00000393779 870 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AL354890.1-201ENST00000413730 346 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AC115283.1-201ENST00000427353 400 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AC092641.1-201ENST00000440229 772 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AL603882.1-201ENST00000463059 681 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 PFN1P6-201ENST00000476786 399 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 AC111193.1-201ENST00000504097 155 ntBASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.1□□□□□ -1.43
PPARGC1AQ9UBK2 RN7SKP288-201ENST00000516227 268 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms