Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CTNNBIP1Q9NSA3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNBIP1Q9NSA3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
CTNNBIP1Q9NSA3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AL590762.2-201ENST00000395798 571 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AL589647.1-201ENST00000402485 466 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AP002530.1-201ENST00000405705 684 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 NPM1P4-201ENST00000414095 812 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 GTF2IP5-201ENST00000414608 731 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 RPL12P28-201ENST00000430852 489 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 RPS29P14-201ENST00000431518 171 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC245047.2-201ENST00000441060 530 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 EIF2S2P5-201ENST00000457635 968 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 PSMC1P13-201ENST00000458195 985 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 ATP5G1P3-201ENST00000463301 410 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC096741.1-201ENST00000472250 846 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 METTL15P1-201ENST00000481421 1045 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 BUD31P1-201ENST00000521828 359 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC004825.1-201ENST00000555068 586 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC068714.1-201ENST00000559623 800 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 RPL7P50-201ENST00000600588 727 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AL139286.1-201ENST00000604465 483 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC008115.4-201ENST00000619780 775 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC000123.2-201ENST00000623124 461 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC079298.2-201ENST00000623885 459 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 AC110792.3-201ENST00000595906 1614 ntBASIC3.81□□□□□ -1.8
CTNNBIP1Q9NSA3 HCFC2P1-201ENST00000392864 1592 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 OR51C1P-202ENST00000641159 1444 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 RNU1-94P-201ENST00000362627 173 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 RN7SKP160-201ENST00000363804 340 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 LAP3P1-201ENST00000403648 294 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 RPL23AP4-201ENST00000427757 463 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AL606490.1-201ENST00000452266 765 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC234781.3-201ENST00000452540 973 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 S100A11P1-201ENST00000477525 312 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 HAUS1P1-201ENST00000505275 832 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 SNORD116-26-201ENST00000516006 96 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 RNA5SP362-201ENST00000516048 118 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC092490.3-201ENST00000545370 572 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC091178.1-203ENST00000584586 279 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC008759.1-201ENST00000589783 983 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AL627230.1-201ENST00000613077 211 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AL591926.8-201ENST00000616876 211 ntBASIC3.8□□□□□ -1.8
CTNNBIP1Q9NSA3 AC009237.17-201ENST00000618111 748 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms