Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SND1-IT1Q9HBX3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RNA5SP28-201ENST00000363841 119 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RNA5SP510-201ENST00000364697 99 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RN7SKP187-201ENST00000365536 330 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 ATP5HP3-201ENST00000396994 486 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AL021331.1-201ENST00000402817 582 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 TDGF1P1-201ENST00000445734 527 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AL354714.3-201ENST00000447284 493 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 YWHAEP1-201ENST00000453697 763 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RPL5P30-201ENST00000465511 891 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RPL23AP65-201ENST00000475608 468 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RPL37P23-201ENST00000492641 294 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC108022.1-201ENST00000493466 478 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 IGLVIV-64-201ENST00000518581 301 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 GLRXP2-201ENST00000555594 321 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC023158.1-201ENST00000561632 1025 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC027243.2-201ENST00000602530 724 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC087283.1-201ENST00000604029 1074 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC007390.2-201ENST00000606229 3803 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC243654.2-201ENST00000612843 443 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC009237.17-201ENST00000618111 748 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 CCT8P1-201ENST00000413611 1657 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 AP001002.1-201ENST00000625148 1513 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 PANDAR-201ENST00000629595 1506 ntBASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SND1-IT1Q9HBX3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SND1-IT1Q9HBX3 ECM1P2-201ENST00000503354 1577 ntBASIC3.21□□□□□ -1.89
SND1-IT1Q9HBX3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 AC009951.1-201ENST00000623674 2614 ntBASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 RNU6-984P-201ENST00000363236 109 ntBASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 RNU4-31P-201ENST00000384211 141 ntBASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 RNU6-185P-201ENST00000384421 107 ntBASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 HMGN1P36-201ENST00000446623 298 ntBASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.21□□□□□ -1.9
SND1-IT1Q9HBX3 EEF1A1P1-201ENST00000447052 739 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms