Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 QRSL1P1-201ENST00000400977 1540 ntBASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 AL353743.4-201ENST00000422653 1547 ntBASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXP3Q9BZS1 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC093909.5-201ENST00000621839 1799 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC016716.1-201ENST00000265882 708 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 RNU4-31P-201ENST00000384211 141 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 TPT1P2-201ENST00000413105 503 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AL035422.1-201ENST00000414193 397 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 UBE2V1P8-201ENST00000437166 265 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AMYP1-201ENST00000440059 1023 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AL592447.1-201ENST00000447592 540 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 HMGB1P7-201ENST00000450921 612 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 DDX39BP2-208ENST00000453923 258 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 RPL34P33-201ENST00000486062 334 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 TOMM22P4-201ENST00000511318 336 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 MED28P5-201ENST00000528254 438 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC118273.2-201ENST00000532092 465 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 OR4A43P-201ENST00000532938 908 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AP001858.2-201ENST00000536213 601 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 OR6C7P-201ENST00000547875 934 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC006115.2-201ENST00000596823 202 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC068276.1-201ENST00000605793 379 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC004948.1-201ENST00000609858 672 ntBASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXP3Q9BZS1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 CASC19-246ENST00000641625 1606 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC019072.1-201ENST00000604535 1551 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms