Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 AC055764.2-201ENST00000610089 670 ntBASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 AL592148.2-201ENST00000612210 372 ntBASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM54Q9BYV2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM54Q9BYV2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM54Q9BYV2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.46□□□□□ -1.53
TRIM54Q9BYV2 AC006206.1-201ENST00000544842 3387 ntBASIC5.46□□□□□ -1.53
TRIM54Q9BYV2 AC004158.1-201ENST00000564508 4319 ntBASIC5.46□□□□□ -1.53
TRIM54Q9BYV2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
TRIM54Q9BYV2 AC008079.2-201ENST00000623543 20396 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC002525.1-201ENST00000624392 1622 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 RNA5SP394-201ENST00000364216 119 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 SNORD116-2-201ENST00000384274 95 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 SNORD116-6-201ENST00000384711 96 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 SNORA40.2-201ENST00000390847 128 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 ERHP2-201ENST00000402323 299 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 NPM1P22-201ENST00000427761 952 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 RPS24P8-201ENST00000431490 402 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC006335.2-201ENST00000437993 330 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 HMGN1P2-201ENST00000445197 310 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 EXTL2P1-201ENST00000446218 416 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AURKAPS1-201ENST00000451805 1212 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 RPS23P6-201ENST00000466136 431 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 NDUFA5P5-201ENST00000468361 342 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 RNU5A-4P-201ENST00000516588 111 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC023632.1-201ENST00000518463 375 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC010306.1-201ENST00000523223 1117 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 EIF4A2P5-201ENST00000529914 499 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 HSPE1P2-201ENST00000554777 306 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC010503.3-201ENST00000594355 540 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC068790.7-201ENST00000602347 528 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC010632.3-201ENST00000611377 369 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AL353726.1-201ENST00000614041 1000 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 uc_338.9-201ENST00000617424 182 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AL158163.2-201ENST00000619110 700 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC004777.1-201ENST00000624317 287 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC017037.3-201ENST00000625016 472 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC087821.2-201ENST00000637086 450 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 MIR193BHG-214ENST00000641765 509 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 AC104964.3-201ENST00000606115 2860 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 Z95331.1-201ENST00000623075 23112 ntBASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.46□□□□□ -1.54
TRIM54Q9BYV2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC079097.1-201ENST00000512187 1399 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 RNF6P1-201ENST00000444889 1784 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms