Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC119751.6-201ENST00000416712 186 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 VDAC1P6-201ENST00000430062 855 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 FTLP19-201ENST00000433300 394 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 RPL5P25-201ENST00000441148 775 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 SEPT14P24-201ENST00000447236 180 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC027104.1-201ENST00000563702 681 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC091042.1-201ENST00000579213 173 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 MIR548Y-201ENST00000582739 110 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC104687.2-201ENST00000604442 342 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 Z82195.1-201ENST00000604558 398 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 FRG1HP-204ENST00000617940 757 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AP003497.2-201ENST00000624220 967 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AP005432.1-201ENST00000580891 3485 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC239868.2-201ENST00000564237 4527 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 AC004076.2-201ENST00000620532 3323 ntBASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RTFDC1Q9BY42 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 RNU6-236P-201ENST00000363886 106 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 RNU1-74P-201ENST00000384108 171 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 RNU6-932P-201ENST00000391108 106 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 Z97832.1-201ENST00000402490 328 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 RPL7P27-201ENST00000403775 720 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 SNORA11-201ENST00000408789 128 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 RNA5SP113-201ENST00000410486 84 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 VN2R3P-201ENST00000422626 1412 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AC124944.2-201ENST00000429866 1242 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 Z80107.1-201ENST00000436830 412 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 NDUFA12P1-201ENST00000455914 406 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 RNU6-276P-201ENST00000516114 96 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 OR5AK3P-201ENST00000527486 1297 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 MIR4789-201ENST00000577469 82 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AL022067.1-201ENST00000602426 454 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 RPP40P2-201ENST00000603596 712 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AC108738.1-201ENST00000603703 237 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AP001002.2-201ENST00000625137 386 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 CCT8P1-201ENST00000413611 1657 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 MTCO1P7-201ENST00000419523 1542 ntBASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RTFDC1Q9BY42 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms