Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MTND5P23-201ENST00000430812 1655 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC104118.1-201ENST00000607625 1589 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 RNA5SP372-201ENST00000390836 115 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AL139095.3-201ENST00000419672 1203 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC008072.1-201ENST00000434254 824 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC092447.2-201ENST00000435487 669 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 TPT1P13-201ENST00000449760 499 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 NPM1P39-201ENST00000449818 867 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 RPS6P2-201ENST00000454208 705 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC092324.1-201ENST00000468671 324 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 MTND4LP2-201ENST00000502312 285 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 GSTP1P1-201ENST00000548078 319 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC063949.1-201ENST00000552900 865 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC027455.1-201ENST00000574104 594 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 ADAD1P2-201ENST00000588476 646 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC098935.2-201ENST00000604222 466 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC096553.1-201ENST00000605169 829 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 FAM25E-202ENST00000608562 189 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 MIR6891-201ENST00000618788 93 ntBASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RSPO3Q9BXY4 AC107068.1-201ENST00000563286 4218 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 RNA5SP87-201ENST00000384155 118 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 MIR141-201ENST00000384975 95 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AL355994.1-201ENST00000424379 260 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 OR1H1P-201ENST00000448731 937 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 RPS3AP53-201ENST00000454716 778 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC105233.1-201ENST00000498840 781 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC090151.1-201ENST00000520784 730 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC124068.1-201ENST00000563131 678 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 MIR4330-201ENST00000579077 105 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 U3.53-201ENST00000628922 216 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 CPHL1P-201ENST00000461341 3407 ntBASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
RSPO3Q9BXY4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
RSPO3Q9BXY4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.18□□□□□ -1.74
RSPO3Q9BXY4 DDX18P4-201ENST00000511690 1966 ntBASIC4.18□□□□□ -1.74
RSPO3Q9BXY4 AL136164.3-201ENST00000624429 3978 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms