Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC107021.2-201ENST00000567714 2095 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 PSG10P-201ENST00000501199 1500 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 TMSB4XP2-201ENST00000335179 210 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 SNORD113-6-201ENST00000363345 75 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 RNU6-185P-201ENST00000384421 107 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 RNU4-72P-201ENST00000410754 173 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 RNA5SP498-201ENST00000411342 120 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 QRSL1P2-201ENST00000418582 964 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC104843.2-201ENST00000427666 297 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC073909.1-201ENST00000447112 999 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 RBMY2TP-201ENST00000451162 947 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 RPS23P2-201ENST00000463671 415 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 RN7SL346P-201ENST00000491561 294 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 RPS17P5-201ENST00000498293 408 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC011411.1-201ENST00000509592 876 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC092121.1-201ENST00000569452 202 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 MIR4776-2-201ENST00000580204 80 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 VN1R83P-201ENST00000595685 445 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 AL392112.1-201ENST00000605115 829 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC108673.3-201ENST00000609183 335 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 VN1R74P-201ENST00000613259 503 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC011939.3-201ENST00000613686 466 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 OR11H2-202ENST00000641517 1085 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 AP004607.3-201ENST00000530354 3915 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AC005261.4-201ENST00000600047 1385 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 ABCC13-202ENST00000463099 3842 ntBASIC5.14□□□□□ -1.59
SNX18Q96RF0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX18Q96RF0 AL390862.1-201ENST00000635467 1469 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 OR9K1P-201ENST00000326513 941 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 RNA5SP273-201ENST00000362484 113 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 RNU6-549P-201ENST00000384433 107 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 RNA5SP284-201ENST00000384547 118 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC005522.1-201ENST00000395416 346 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 BX284632.2-201ENST00000421091 399 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC005345.1-201ENST00000431868 217 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC090018.1-201ENST00000434369 367 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 HMGB3P10-201ENST00000434734 572 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AL512605.1-202ENST00000441919 381 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AL359955.2-201ENST00000445380 353 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 RPL31P15-201ENST00000449770 338 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC233982.1-201ENST00000451247 436 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms