Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 MAPK10-371ENST00000641952 5209 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AP001157.1-201ENST00000550837 2339 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 Z99129.4-201ENST00000624649 2435 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 RNU6-1115P-201ENST00000362490 106 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 RN7SKP130-201ENST00000364924 301 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 RN7SKP208-201ENST00000365474 361 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 SNORD116-23-201ENST00000384645 92 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 RPL31P52-201ENST00000407532 367 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 SNORA77.2-201ENST00000408571 112 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AP000534.2-201ENST00000412729 568 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 VDAC1P10-201ENST00000416715 891 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 DPH3P2-201ENST00000422618 250 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 CHEK2P5-201ENST00000423877 246 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 RPL34P6-201ENST00000432390 345 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 GAPDHP59-201ENST00000435908 267 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC104651.2-201ENST00000447549 528 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 AL121578.2-201ENST00000448797 447 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC040975.1-201ENST00000472104 316 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 RN7SL306P-201ENST00000492941 296 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 IGKV2D-38-201ENST00000518423 240 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 RPL7P20-201ENST00000520308 745 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AL138895.2-201ENST00000603019 178 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC005518.2-201ENST00000603254 282 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC018889.1-201ENST00000605372 397 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 uc_338.31-201ENST00000615595 186 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 AL122023.1-201ENST00000622847 530 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 AC245505.2-201ENST00000553572 3055 ntBASIC7.8□□□□□ -1.16
LRCH3Q96II8 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 OR11H5P-202ENST00000641612 1325 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 AL157831.2-201ENST00000564681 3095 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 TTC3P1-201ENST00000399586 6081 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 Y_RNA.455-201ENST00000384230 98 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 MIR514A2-201ENST00000385131 88 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 MIR514A3-201ENST00000385132 88 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 RN7SKP232-201ENST00000410170 290 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 RPL37P10-201ENST00000412884 288 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 TRGVB-201ENST00000453257 471 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 RPL5P30-201ENST00000465511 891 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 IGKV3D-31-201ENST00000519131 281 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC087854.1-201ENST00000519706 414 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms