Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL359219.2-201ENST00000555184 348 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 MTCYBP23-201ENST00000558717 1102 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 ZNF971P-201ENST00000562068 1249 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 MIR548Y-201ENST00000582739 110 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 RPP40P2-201ENST00000603596 712 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 MIR6837-201ENST00000620884 64 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 AC006927.4-201ENST00000639187 543 ntBASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4CQ96CF2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 GTF2H2B-203ENST00000508065 1432 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 U3.2-201ENST00000362981 210 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 RPL7P27-201ENST00000403775 720 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 SPTLC1P2-201ENST00000407089 121 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 EEF1B2P5-201ENST00000444820 548 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AL163193.1-201ENST00000444895 788 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AL031313.1-201ENST00000448435 256 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 RPS3AP53-201ENST00000454716 778 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC104687.1-201ENST00000485829 412 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 IGBP1P4-201ENST00000503202 879 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 OR10G5P-201ENST00000532733 358 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC044860.2-201ENST00000561005 179 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC108738.1-201ENST00000603703 237 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC009027.1-201ENST00000604510 479 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AC135068.5-201ENST00000624197 983 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 SAMMSON-209ENST00000641222 1100 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 AL590763.1-201ENST00000398297 1545 ntBASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4CQ96CF2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
CHMP4CQ96CF2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
CHMP4CQ96CF2 RBPJP2-201ENST00000618187 1444 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 RNA5SP187-201ENST00000384400 119 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 RNU1-149P-201ENST00000390870 161 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 HMGB3P18-201ENST00000406327 590 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 OR52B5P-201ENST00000435337 951 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 GAPDHP25-201ENST00000447061 1001 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 TRY2P-201ENST00000448860 689 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 OR52E3P-201ENST00000452083 936 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 RN7SL172P-201ENST00000460535 303 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 RPL7P48-201ENST00000461513 746 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 RPL7P39-201ENST00000481157 744 ntBASIC6.33□□□□□ -1.4
CHMP4CQ96CF2 RPL7P40-201ENST00000481703 745 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms