Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 HMGB2P1-201ENST00000591146 634 ntBASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 AC090510.2-201ENST00000617465 629 ntBASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 AC234782.5-201ENST00000617723 324 ntBASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 AL359757.1-201ENST00000623176 255 ntBASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.69□□□□□ -1.82
TTC9CQ8N5M4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 MIR448-201ENST00000362131 111 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 RNA5SP191-201ENST00000362585 102 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 RN7SKP278-201ENST00000410504 342 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 RN7SKP100-201ENST00000411258 284 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 OR51B3P-201ENST00000412287 913 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AL356968.2-201ENST00000412769 1257 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 RPL21P108-201ENST00000413857 481 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AL590609.2-201ENST00000421430 368 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC097523.2-201ENST00000435551 652 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC098799.3-201ENST00000506095 438 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC090281.1-201ENST00000523019 276 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 SOX5P1-201ENST00000524155 1127 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 MIR3934-201ENST00000579806 107 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 MIR4737-201ENST00000583979 81 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AL031320.1-201ENST00000604177 357 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 MIR6719-201ENST00000622428 87 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AC125257.1-201ENST00000560400 2930 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 AL356489.2-201ENST00000566968 3528 ntBASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TTC9CQ8N5M4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AC074029.4-201ENST00000624796 1859 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AL355852.1-201ENST00000454081 1771 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 GAPDHP15-201ENST00000398586 975 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 VDAC1P9-201ENST00000412766 841 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 RSU1P3-201ENST00000412878 835 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AC140479.3-201ENST00000418944 1126 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AC005154.2-201ENST00000438110 379 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AL162388.1-201ENST00000450912 352 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AC091685.2-201ENST00000454924 864 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AC005008.1-201ENST00000456151 612 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AC107015.1-201ENST00000466902 747 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 RPS6P4-201ENST00000494693 758 ntBASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.67□□□□□ -1.82
TTC9CQ8N5M4 BRD9P1-201ENST00000529855 560 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms