Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU1-24P-201ENST00000364285 165 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RN7SKP257-201ENST00000364525 309 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-343P-201ENST00000364709 104 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-74P-201ENST00000384235 107 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-441P-201ENST00000384545 106 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 ARF4P3-201ENST00000397387 509 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 SUMO2P13-201ENST00000403109 272 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RPS7P8-201ENST00000418311 581 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RPL5P25-201ENST00000441148 775 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 TDGF1P6-201ENST00000463873 448 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC021660.1-201ENST00000465006 554 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RN7SL414P-201ENST00000469545 294 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RPL7P17-201ENST00000470927 724 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC096754.1-201ENST00000508904 818 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-277P-201ENST00000516272 106 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-1045P-201ENST00000516321 107 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC123904.2-201ENST00000548059 300 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 LSM6P2-201ENST00000552208 177 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC243312.1-201ENST00000570582 275 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RPS7P1-201ENST00000571702 585 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 RN7SL178P-201ENST00000582930 304 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AL021918.1-201ENST00000603933 236 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC004853.1-201ENST00000604902 698 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AC068234.2-201ENST00000619646 522 ntBASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
DEPDC4Q8N2C3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC008957.3-201ENST00000624112 2242 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 RNA5SP483-201ENST00000363431 118 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 MIR498-201ENST00000385134 124 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-510P-201ENST00000391239 108 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC068050.1-201ENST00000394891 380 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC092952.1-201ENST00000397646 1209 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 GAS8-AS1-201ENST00000408886 435 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 RNA5SP231-201ENST00000410496 138 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-1068P-201ENST00000410958 103 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 IFNA12P-201ENST00000413147 571 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC109638.1-201ENST00000417406 326 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 UQCRBP1-201ENST00000421129 336 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC003071.2-201ENST00000423857 315 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 RBMY2QP-201ENST00000429799 1147 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC002553.1-201ENST00000442828 802 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 RPS20P32-201ENST00000456044 356 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 RN7SL213P-201ENST00000463482 317 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 RN7SL55P-201ENST00000464534 297 ntBASIC6.8□□□□□ -1.32
DEPDC4Q8N2C3 AC026336.1-201ENST00000466577 351 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms