Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 RPL12P11-201ENST00000439970 501 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 MTND6P13-201ENST00000443510 523 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 PCMTD1P1-201ENST00000455560 355 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC083806.1-201ENST00000468934 316 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 RPL23AP37-201ENST00000479658 549 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC024558.1-201ENST00000505008 528 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC093303.1-201ENST00000514549 295 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 CYP4F27P-201ENST00000514557 494 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 RNU6-255P-201ENST00000516957 105 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AP000676.2-201ENST00000529711 301 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 OR5B19P-201ENST00000531766 928 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC026464.5-201ENST00000562497 722 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 DYNLL1P1-201ENST00000595442 269 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 MTCO2P22-201ENST00000603246 681 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC004908.1-201ENST00000606572 541 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AL008723.3-201ENST00000608926 449 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 U2.1-201ENST00000618978 145 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC111152.1-202ENST00000635848 339 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 MRPS17P1-201ENST00000596009 3130 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC024560.2-201ENST00000507981 1497 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 RN7SKP129-201ENST00000410288 299 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 HMGB1P11-201ENST00000413899 637 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 PIGFP2-201ENST00000421400 651 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 DPY19L1P2-201ENST00000426647 915 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC096644.2-201ENST00000429278 159 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AL359672.1-201ENST00000442302 409 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 H2AFZP6-201ENST00000444403 394 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 RNU6-1225P-201ENST00000516336 65 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 RNU6-635P-201ENST00000516651 102 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC005363.1-201ENST00000530779 351 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 PCNAP4-201ENST00000532690 730 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC055876.1-202ENST00000567053 138 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 OR1E3-201ENST00000575608 948 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC090236.2-201ENST00000587933 1101 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 DISC2.1-201ENST00000612827 205 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC097641.3-201ENST00000613523 464 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 MIR6778-201ENST00000617912 73 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 RMST_9.1-201ENST00000619945 193 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC091903.1-201ENST00000624322 454 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AC138649.5-201ENST00000637456 137 ntBASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS3Q8IXF0 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms