Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC007390.2-201ENST00000606229 3803 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 RN7SKP74-201ENST00000362849 309 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 MIR600-201ENST00000385007 98 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 NUDT19P3-201ENST00000404698 555 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AL590290.1-201ENST00000405336 380 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 RNU4-74P-201ENST00000411280 161 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 MTND4P11-201ENST00000417020 1058 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AL138785.1-201ENST00000425821 331 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 RPS29P10-201ENST00000439197 166 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 CNOT7P2-201ENST00000441051 832 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 PRPF38AP1-201ENST00000451976 933 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC026348.1-201ENST00000462549 1053 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 RN7SL189P-201ENST00000468631 289 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 RN7SL177P-201ENST00000476596 299 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 RPL7P41-201ENST00000485823 957 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC111193.1-201ENST00000504097 155 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 HIGD1AP14-201ENST00000507617 282 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC022790.1-201ENST00000522872 204 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC024940.3-201ENST00000538551 316 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC025918.2-201ENST00000558683 763 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AL109741.3-201ENST00000561748 592 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 NF1P5-201ENST00000588287 448 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC010503.3-201ENST00000594355 540 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC005776.1-201ENST00000603164 290 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC016542.1-201ENST00000608259 493 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AP004607.9-201ENST00000618202 316 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AL163051.2-201ENST00000618976 735 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AP002505.2-201ENST00000623585 696 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 OR2L1P-202ENST00000641567 1023 ntBASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP54Q7Z3B4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC091046.3-201ENST00000631455 1574 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 SMG1P4-204ENST00000523028 4131 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AL031119.1-201ENST00000404707 1879 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 IGKV7-3-201ENST00000357453 298 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 SNORA17.1-201ENST00000362945 126 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 RNU6-792P-201ENST00000363490 107 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 RNA5SP90-201ENST00000364801 99 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 DUTP5-201ENST00000406790 469 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 RPS4XP16-201ENST00000427198 791 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 BX119904.1-201ENST00000432026 348 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 GAPDHP58-201ENST00000438477 1006 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC245047.2-201ENST00000441060 530 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 BX842559.2-201ENST00000451418 605 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 HMGB1P5-202ENST00000451497 985 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AL389915.2-201ENST00000454576 441 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 RN7SL814P-201ENST00000487715 300 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 RPS4XP14-201ENST00000493072 781 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 SNRPCP2-201ENST00000504370 475 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 ENPP7P11-201ENST00000505915 627 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 RNU6-513P-201ENST00000516104 104 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms