Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PROS2P-201ENST00000474651 1951 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC023421.1-201ENST00000590535 1785 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 RNA5SP223-201ENST00000365174 120 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 MIR320B1-201ENST00000390209 79 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 HSPA8P15-201ENST00000401676 786 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 VN1R12P-201ENST00000403778 876 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AL359643.1-201ENST00000404109 423 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 RN7SKP222-201ENST00000410651 315 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 RNA5SP498-201ENST00000411342 120 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC105402.1-201ENST00000413336 545 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 SLC20A1P1-201ENST00000413906 956 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 GAPDHP58-201ENST00000438477 1006 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 PTGES3P1-201ENST00000439531 483 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AL353093.1-201ENST00000441292 436 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 EEF1B2P6-201ENST00000445713 673 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 GAPDHP25-201ENST00000447061 1001 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC105399.1-202ENST00000447303 205 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AL035407.2-201ENST00000454090 378 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 METTL15P1-201ENST00000481421 1045 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 RPL21P131-201ENST00000497298 483 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AP006245.2-201ENST00000522004 300 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC024405.1-201ENST00000532521 1042 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC006518.2-201ENST00000542513 940 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC008083.2-201ENST00000546707 476 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 MTND3P12-201ENST00000559068 328 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC005252.1-201ENST00000604518 1063 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC004908.3-201ENST00000610248 625 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC037198.3-201ENST00000616754 526 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 OR8A1-204ENST00000642111 1145 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 AL672167.1-204ENST00000641875 3017 ntBASIC4.73□□□□□ -1.65
SHFQ7M4L6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.73□□□□□ -1.65
SHFQ7M4L6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHFQ7M4L6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 RBPJP2-201ENST00000618187 1444 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC017079.1-201ENST00000333650 415 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 RNU6-543P-201ENST00000362576 108 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 RNA5SP122-201ENST00000384457 108 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 OR4K12P-201ENST00000406538 961 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 TCEA1P4-201ENST00000415066 844 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC246680.2-201ENST00000422106 389 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC104333.2-201ENST00000422630 192 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 TNPO1P1-201ENST00000423641 1138 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 SRSF1P1-201ENST00000424058 520 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC012519.1-201ENST00000424588 610 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms