Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 MIR708-201ENST00000390708 88 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 PPIAP9-201ENST00000403866 498 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 OR3A2-201ENST00000408891 1076 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 PRELID3BP11-201ENST00000414230 479 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AL596448.1-201ENST00000415024 392 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC079355.1-201ENST00000421770 223 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 MTATP6P11-201ENST00000428071 670 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 BX323845.3-201ENST00000428215 527 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 CDY14P-201ENST00000431260 1014 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC002504.1-201ENST00000438281 691 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 CDY12P-201ENST00000440679 1015 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 CDY13P-201ENST00000445813 1015 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 CDY23P-201ENST00000451661 1014 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 RPS17P15-201ENST00000475609 349 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 RN7SL205P-201ENST00000490174 284 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC083829.1-201ENST00000503756 657 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC109481.1-201ENST00000509173 282 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC008562.1-201ENST00000521763 330 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC020978.7-201ENST00000575953 1187 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 ELOCP28-201ENST00000590044 317 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 NTAN1P1-201ENST00000603150 646 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 RN7SL787P-201ENST00000613000 284 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC007204.2-201ENST00000615022 616 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC015804.1-201ENST00000622935 435 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC020923.1-201ENST00000624021 917 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AL356094.1-201ENST00000624663 1212 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC007683.2-201ENST00000624681 714 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 CR788268.1-201ENST00000603931 1809 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 AC119744.1-201ENST00000454746 1715 ntBASIC4.66□□□□□ -1.66
C11orf88Q6PI97 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
C11orf88Q6PI97 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
C11orf88Q6PI97 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.65□□□□□ -1.66
C11orf88Q6PI97 AP001273.1-201ENST00000624493 3152 ntBASIC4.65□□□□□ -1.66
C11orf88Q6PI97 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
C11orf88Q6PI97 AL049737.1-201ENST00000413920 1403 ntBASIC4.65□□□□□ -1.66
C11orf88Q6PI97 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
C11orf88Q6PI97 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.65□□□□□ -1.66
C11orf88Q6PI97 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
C11orf88Q6PI97 GAPDHP24-201ENST00000328713 983 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 RNU1-19P-201ENST00000363306 165 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 RNA5SP242-201ENST00000364171 118 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 RNA5SP500-201ENST00000364486 119 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 Z68694.1-201ENST00000413929 841 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 MRPL53P1-201ENST00000414323 319 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 COX5BP7-201ENST00000414780 274 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC016769.2-201ENST00000414815 475 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 BMS1P17-202ENST00000416720 316 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 NIFKP3-201ENST00000417799 865 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 EIF2S2P3-201ENST00000428356 999 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 RPL36AP39-201ENST00000445859 318 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC068135.1-201ENST00000446164 246 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 TPT1P1-201ENST00000458495 518 ntBASIC4.65□□□□□ -1.67
C11orf88Q6PI97 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.65□□□□□ -1.67
C11orf88Q6PI97 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms