Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 Y_RNA.86-201ENST00000363020 111 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 SNORD81.2-201ENST00000365153 76 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 MIR1203-201ENST00000408812 85 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AP000357.1-201ENST00000409926 1165 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 RN7SKP293-201ENST00000411389 296 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AL035660.1-201ENST00000422041 222 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 RPS25P9-201ENST00000435591 252 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 PPIAP10-201ENST00000438675 458 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 BX679664.2-201ENST00000439282 283 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC233279.1-201ENST00000455300 423 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 UBFD1P1-201ENST00000473259 814 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 RN7SL284P-201ENST00000498823 275 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC112184.1-201ENST00000505179 312 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 CCDC34P1-201ENST00000507441 517 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 OR51A1P-201ENST00000511110 946 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC106800.3-201ENST00000511389 308 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 RPL7L1P4-201ENST00000513004 707 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 SNORA31.13-201ENST00000516624 135 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 PAICSP4-201ENST00000517543 1253 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 ZNF705CP-201ENST00000530515 889 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC092121.1-201ENST00000569452 202 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 VN1R107P-201ENST00000601784 209 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 Z95327.3-201ENST00000610385 572 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 MIR6793-201ENST00000612376 63 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 MLECP1-201ENST00000615893 709 ntBASIC8.01□□□□□ -1.13
RC3H1Q5TC82 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.01□□□□□ -1.13
RC3H1Q5TC82 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RC3H1Q5TC82 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
RC3H1Q5TC82 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8□□□□□ -1.13
RC3H1Q5TC82 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RC3H1Q5TC82 RNU1-150P-201ENST00000362491 162 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 RNU1-49P-201ENST00000363468 159 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8□□□□□ -1.13
RC3H1Q5TC82 RNU6-483P-201ENST00000384088 108 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 U3.25-201ENST00000391209 220 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AC104297.1-201ENST00000393779 870 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AL356432.1-201ENST00000405809 419 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 RNU4-55P-201ENST00000410731 137 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AMD1P2-201ENST00000412936 992 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 RPL7P44-201ENST00000424827 742 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC8□□□□□ -1.13
RC3H1Q5TC82 GAPDHP48-201ENST00000436626 961 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AP006222.1-205ENST00000450734 457 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8□□□□□ -1.13
RC3H1Q5TC82 RPL39P36-201ENST00000490784 156 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AC010343.2-201ENST00000510162 224 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC114781.3-201ENST00000512083 142 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 IGKV1D-22-201ENST00000518953 324 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AC008802.1-201ENST00000519121 791 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 TRMT10BP1-201ENST00000519377 943 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AP002748.2-201ENST00000528671 348 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC025678.1-201ENST00000567861 338 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms