Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 U47924.1-201ENST00000606539 434 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 MIR6070-201ENST00000613967 103 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 pRNA.9-201ENST00000618609 89 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 SNORA11.6-201ENST00000619030 128 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC069542.2-201ENST00000624816 216 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 FKBP1AP4-201ENST00000631775 336 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 OR2A20P-201ENST00000479887 2913 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC073342.2-201ENST00000595842 1800 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 CAP1P2-201ENST00000417455 1409 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC020978.8-201ENST00000571975 3022 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 DDX18P6-201ENST00000450119 1997 ntBASIC8.02□□□□□ -1.12
VARS2Q5ST30 AL080317.3-201ENST00000607434 4315 ntBASIC8.02□□□□□ -1.12
VARS2Q5ST30 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
VARS2Q5ST30 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 RBMX2P2-201ENST00000257020 946 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RNU6-1252P-201ENST00000363054 104 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 Y_RNA.167-201ENST00000363735 109 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 Y_RNA.170-201ENST00000363746 110 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 Y_RNA.214-201ENST00000364201 112 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RNU6-22P-201ENST00000384355 107 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 Y_RNA.577-201ENST00000384794 101 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RNU4-25P-201ENST00000410569 230 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RNA5SP345-201ENST00000410646 108 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 RBMY1KP-201ENST00000423480 476 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AL451074.4-201ENST00000447545 470 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 BX248409.1-201ENST00000455497 255 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RPL35AP28-201ENST00000459730 331 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 AC007547.2-201ENST00000468802 360 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RPS23P3-201ENST00000470993 430 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RN7SL332P-201ENST00000482163 254 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RN7SL741P-201ENST00000482473 289 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 OR9A1P-202ENST00000484361 945 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 SCARNA20.1-201ENST00000516009 138 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AC138761.3-201ENST00000579993 334 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AC006254.3-201ENST00000603353 884 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AL121985.2-201ENST00000621192 555 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 RPL23AP61-201ENST00000623642 466 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AL359091.1-201ENST00000449048 1734 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 AC079178.2-201ENST00000439323 1624 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 DDX18P4-201ENST00000511690 1966 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 AL136984.1-201ENST00000607611 1893 ntBASIC8.02□□□□□ -1.13
VARS2Q5ST30 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
VARS2Q5ST30 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VARS2Q5ST30 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
VARS2Q5ST30 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.01□□□□□ -1.13
VARS2Q5ST30 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
VARS2Q5ST30 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
VARS2Q5ST30 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
VARS2Q5ST30 AL139805.2-201ENST00000455305 2433 ntBASIC8.01□□□□□ -1.13
VARS2Q5ST30 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
VARS2Q5ST30 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VARS2Q5ST30 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VARS2Q5ST30 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
VARS2Q5ST30 RN7SKP184-201ENST00000362348 333 ntBASIC8.01□□□□□ -1.13
VARS2Q5ST30 RNU4-48P-201ENST00000365559 182 ntBASIC8.01□□□□□ -1.13
VARS2Q5ST30 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.01□□□□□ -1.13
VARS2Q5ST30 AL391419.1-201ENST00000398901 1275 ntBASIC8.01□□□□□ -1.13
VARS2Q5ST30 TMSB4XP8-201ENST00000402089 135 ntBASIC8.01□□□□□ -1.13
VARS2Q5ST30 RN7SKP146-201ENST00000410242 334 ntBASIC8.01□□□□□ -1.13
VARS2Q5ST30 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.01□□□□□ -1.13
VARS2Q5ST30 AL357752.1-201ENST00000412817 349 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms