Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MIR7154-201ENST00000620673 73 ntBASIC2.59□□□□□ -1.99
LINC01554Q52M75 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.59□□□□□ -1.99
LINC01554Q52M75 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.59□□□□□ -1.99
LINC01554Q52M75 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
LINC01554Q52M75 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC01554Q52M75 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.59□□□□□ -2
LINC01554Q52M75 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC2.59□□□□□ -2
LINC01554Q52M75 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LINC01554Q52M75 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 USP8-204ENST00000425032 3559 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 ASNSP1-204ENST00000641977 1664 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 IGKV7-3-201ENST00000357453 298 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 SUGT1P2-201ENST00000379452 992 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 MIR195-201ENST00000385194 87 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC2.58□□□□□ -2
LINC01554Q52M75 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AL357515.1-201ENST00000402967 542 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 AP000567.1-201ENST00000406413 156 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 Z98941.1-201ENST00000407764 100 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AC009237.5-201ENST00000414271 501 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC092865.3-201ENST00000425390 1026 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 TUBB4BP6-201ENST00000437576 479 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 ARL5AP3-201ENST00000439327 386 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 TRIM60P16-201ENST00000444048 694 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 AL161636.2-201ENST00000445179 927 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 AL445466.1-201ENST00000448432 357 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 AL606490.1-201ENST00000452266 765 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AL356390.1-201ENST00000455684 397 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 RN7SL254P-201ENST00000460609 284 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 RPS7P10-201ENST00000464254 603 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 RPL23AP71-201ENST00000470966 469 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 ALG13-211ENST00000473389 693 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 RPL31P13-201ENST00000484151 370 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 PPIAP19-201ENST00000486414 492 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 RN7SL57P-201ENST00000493687 290 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC093755.1-201ENST00000512950 1023 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 MRPS5P3-201ENST00000515577 166 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 RNA5SP96-201ENST00000516041 107 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 AP004607.5-201ENST00000532034 217 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AL121594.2-201ENST00000541658 472 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC2.58□□□□□ -2
LINC01554Q52M75 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC141257.3-201ENST00000572906 215 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC2.58□□□□□ -2
LINC01554Q52M75 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 HMGB1P51-201ENST00000605166 638 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC2.58□□□□□ -2
LINC01554Q52M75 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 AC012676.3-201ENST00000614983 479 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 AC007204.1-201ENST00000621794 555 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 MIR8080-201ENST00000622224 89 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 TEX41-279ENST00000629149 609 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01554Q52M75 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LINC01554Q52M75 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 FAM91A3P-201ENST00000456826 2544 ntBASIC2.58□□□□□ -2
LINC01554Q52M75 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC2.58□□□□□ -2
LINC01554Q52M75 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01554Q52M75 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01554Q52M75 FAM35DP-201ENST00000323387 2712 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms