Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX4Q06945 VN1R79P-201ENST00000593540 513 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AC055764.2-201ENST00000610089 670 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AL096712.1-201ENST00000614561 159 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 AC009159.1-201ENST00000618386 642 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AL136228.1-201ENST00000622221 319 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AC009033.1-201ENST00000624279 431 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AC024614.3-201ENST00000637860 256 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX4Q06945 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC092724.1-201ENST00000624623 3397 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX4Q06945 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 PABPC1P8-201ENST00000452851 2086 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SOX4Q06945 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 TMSB4XP2-201ENST00000335179 210 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 RNU6-543P-201ENST00000362576 108 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 RNU6-501P-201ENST00000364072 100 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 Y_RNA.509-201ENST00000384506 99 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SOX4Q06945 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 HMGB3P23-201ENST00000414981 585 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX4Q06945 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX4Q06945 OFD1P18Y-201ENST00000420889 959 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AL365184.2-201ENST00000431139 435 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 RPS29P14-201ENST00000431518 171 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 ATP5HP2-201ENST00000433885 485 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX4Q06945 RPL7P31-201ENST00000450192 724 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 RN7SL221P-201ENST00000466190 281 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC013828.1-201ENST00000481845 158 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX4Q06945 AC117522.3-201ENST00000507974 584 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC091133.4-201ENST00000511142 308 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX4Q06945 Y_RNA.667-201ENST00000516212 107 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 RNU6-1225P-201ENST00000516336 65 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 RNA5SP400-201ENST00000517155 111 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC060775.1-201ENST00000518241 520 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX4Q06945 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.59□□□□□ -1.35
SOX4Q06945 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SOX4Q06945 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.59□□□□□ -1.35
SOX4Q06945 NIFKP8-201ENST00000560500 874 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX4Q06945 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX4Q06945 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX4Q06945 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 AC027243.2-201ENST00000602530 724 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX4Q06945 AC141002.1-201ENST00000607025 279 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC024560.3-201ENST00000608482 349 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 MIR6809-201ENST00000612189 116 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC007342.8-201ENST00000623278 678 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 SNX18P12-201ENST00000624821 759 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 AC129915.3-201ENST00000634128 948 ntBASIC6.59□□□□□ -1.35
SOX4Q06945 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
SOX4Q06945 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX4Q06945 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX4Q06945 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX4Q06945 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
SOX4Q06945 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.59□□□□□ -1.36
SOX4Q06945 AC007406.5-201ENST00000570140 3170 ntBASIC6.59□□□□□ -1.36
SOX4Q06945 AC078880.4-201ENST00000617627 1749 ntBASIC6.59□□□□□ -1.36
SOX4Q06945 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.59□□□□□ -1.36
SOX4Q06945 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SOX4Q06945 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SOX4Q06945 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms